Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra016361.1-P | Field mustard | cytosol | 89.73 | 99.24 |
| CDX91697 | Canola | cytosol | 93.84 | 92.57 |
| CDY41464 | Canola | cytosol | 82.88 | 82.31 |
| AT1G23120.2 | Thale cress | vacuole | 83.56 | 61.62 |
| CDY09498 | Canola | cytosol | 37.67 | 37.67 |
| CDY03712 | Canola | cytosol | 36.99 | 36.99 |
| VIT_01s0011g05070.t01 | Wine grape | cytosol | 17.12 | 33.78 |
| VIT_01s0011g05120.t01 | Wine grape | cytosol | 34.93 | 33.77 |
| VIT_01s0011g05110.t01 | Wine grape | cytosol | 33.56 | 32.45 |
| VIT_01s0011g05130.t01 | Wine grape | cytosol | 32.88 | 31.79 |
| KRH32895 | Soybean | cytosol | 32.19 | 30.72 |
| CDX91696 | Canola | cytosol | 32.19 | 29.94 |
| KRH44771 | Soybean | cytosol, mitochondrion | 30.82 | 29.61 |
| CDY41465 | Canola | cytosol | 31.51 | 29.3 |
| CDY12485 | Canola | cytosol | 19.86 | 29.29 |
| KRH44774 | Soybean | cytosol | 30.14 | 28.95 |
| CDX72752 | Canola | cytosol | 26.71 | 28.26 |
| KRH17964 | Soybean | cytosol | 29.45 | 28.1 |
| KRH07297 | Soybean | cytosol | 28.77 | 27.81 |
| CDY23474 | Canola | cytosol | 30.14 | 26.99 |
| KRH13141 | Soybean | cytosol | 28.08 | 26.97 |
| KRH72121 | Soybean | cytosol, vacuole | 26.03 | 26.95 |
| CDX68328 | Canola | cytosol | 30.14 | 26.83 |
| KRH13115 | Soybean | cytosol | 27.4 | 26.32 |
| CDY12484 | Canola | cytosol | 28.77 | 26.25 |
| KRH38207 | Soybean | cytosol | 27.4 | 26.14 |
| CDY09495 | Canola | cytosol | 28.08 | 25.95 |
| CDY65619 | Canola | cytosol | 28.77 | 25.61 |
| CDY03715 | Canola | cytosol | 28.08 | 25.0 |
| KRH44775 | Soybean | cytosol, mitochondrion | 26.03 | 24.84 |
| CDY21418 | Canola | cytosol | 30.82 | 24.73 |
| CDX72753 | Canola | cytosol | 26.03 | 24.05 |
| CDX96283 | Canola | cytosol | 22.6 | 23.91 |
| CDX89696 | Canola | cytosol | 24.66 | 23.84 |
| CDY03713 | Canola | cytosol | 23.97 | 22.73 |
| CDY17433 | Canola | cytosol | 23.29 | 22.52 |
| CDY70076 | Canola | cytosol | 21.92 | 22.07 |
| CDY09499 | Canola | cytosol | 20.55 | 21.9 |
| CDY00801 | Canola | cytosol | 25.34 | 20.9 |
| CDY68859 | Canola | cytosol | 20.55 | 20.69 |
| CDY12480 | Canola | cytosol | 22.6 | 20.5 |
| CDY41463 | Canola | cytosol | 21.23 | 19.25 |
| CDY03718 | Canola | cytosol | 28.77 | 18.34 |
| CDY09492 | Canola | cytosol | 28.08 | 17.9 |
| CDX92456 | Canola | cytosol | 16.44 | 17.78 |
| CDY25772 | Canola | cytosol | 19.18 | 17.61 |
| CDY12482 | Canola | cytosol | 15.07 | 17.6 |
| CDY16542 | Canola | cytosol | 15.75 | 17.04 |
| CDY25771 | Canola | cytosol | 18.49 | 16.98 |
| CDX96282 | Canola | cytosol | 8.9 | 10.66 |
| CDY11541 | Canola | cytosol | 8.9 | 8.39 |
Protein Annotations
| EnsemblPlants:CDY41462 | EnsemblPlantsGene:GSBRNA2T00073064001 | Gene3D:3.30.530.20 | GO:A0A078HUD8 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0008150 | GO:GO:0009607 | InterPro:Bet_v_I/MLP | InterPro:IPR023393 | InterPro:START-like_dom_sf | PANTHER:PTHR31338 |
| PFAM:PF00407 | ProteinID:CDY41462 | ProteinID:CDY41462.1 | SMART:SM01037 | SUPFAM:SSF55961 | UniParc:UPI0004EE294F |
| UniProt:A0A078HUD8 | MapMan:35.1 | : | : | : | : |
Description
BnaA08g20640DBnaA08g20640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUD8]
Coordinates
chrLK032498:-:122859..123458
Molecular Weight (calculated)
16966.0 Da
IEP (calculated)
4.296
GRAVY (calculated)
-0.544
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGVQTLDLE IQVNMPADRF FNSFKNKEGS FTDKTEAVYI HHDDTNSSIQ IWNLIVDGKM EQIKEKTEVD EENMSVSFLA MEGDVLEQYK SYKITLDVVP
101: KDDRVCIAKW KWEYEKLNDD VPPPTKYIAF VADYTRELEA RLLSES
101: KDDRVCIAKW KWEYEKLNDD VPPPTKYIAF VADYTRELEA RLLSES
001: MLIKKLLRIR HLPCLPLFLF SSLGFLLYAF CYGKDKQQKS QRERLDYLRA MAGVQTLELE IQVNMTAERF FKTFKKKEGN FTDKTEAVYV HRDDPTSNSS
101: IQIWNFIVDG KMEQIKEKID VDEENKSVSF LALEGDVLKQ YKSYKITLDV VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
101: IQIWNFIVDG KMEQIKEKID VDEENKSVSF LALEGDVLKQ YKSYKITLDV VPKDHKVCIA KWTWEYEKLN DDVPPPTRYT AFVEDYTRDL ETRLLSES
Arabidopsis Description
Polyketide cyclase/dehydrase and lipid transport superfamily protein [Source:TAIR;Acc:AT1G23120]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.