Factsheet for VIT_01s0011g05190.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_18s0001g09580.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G70830.1	VIT_18s0001g09580.t01	AT5G43080.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0011g05170.t01	Wine grape	cytosol	39.74	93.75
VIT_01s0011g05150.t01	Wine grape	cytosol	63.58	69.57
VIT_01s0011g05180.t01	Wine grape	cytosol	67.55	67.55
Solyc09g005500.2.1	Tomato	extracellular	47.68	47.68
CDY23474	Canola	cytosol	50.99	47.24
PGSC0003DMT400022679	Potato	cytosol	47.02	47.02
Solyc05g046140.2.1	Tomato	endoplasmic reticulum, extracellular	46.36	46.67
CDY03715	Canola	cytosol	50.33	46.34
CDY09495	Canola	cytosol	48.34	46.2
KRH13947	Soybean	cytosol	47.02	45.81
CDX68328	Canola	cytosol	49.67	45.73
CDY65619	Canola	cytosol	49.67	45.73
PGSC0003DMT400041455	Potato	cytosol	45.7	45.7
PGSC0003DMT400077743	Potato	cytosol	45.7	45.7
VIT_01s0011g05120.t01	Wine grape	cytosol	45.7	45.7
Bra003939.1-P	Field mustard	cytosol	49.01	45.4
PGSC0003DMT400056811	Potato	cytosol	38.41	44.96
AT1G70890.1	Thale cress	cytosol	47.02	44.94
CDX91696	Canola	cytosol	46.36	44.59
Bra007946.1-P	Field mustard	cytosol	40.4	44.53
Solyc04g007830.2.1	Tomato	cytosol	39.07	44.03
Solyc09g005400.2.1	Tomato	cytosol	43.71	44.0
PGSC0003DMT400075925	Potato	cytosol	33.77	43.97
AT1G70840.1	Thale cress	cytosol	49.67	43.86
PGSC0003DMT400041449	Potato	cytosol	33.11	43.86
VIT_01s0011g05110.t01	Wine grape	cytosol	43.71	43.71
CDY12485	Canola	cytosol	28.48	43.43
PGSC0003DMT400031542	Potato	cytosol	43.71	43.14
PGSC0003DMT400031386	Potato	cytosol	43.05	43.05
Bra016364.1-P	Field mustard	cytosol	44.37	42.68
CDY41465	Canola	cytosol	44.37	42.68
Solyc05g046150.2.1	Tomato	cytosol, extracellular	42.38	42.67
Solyc09g005420.2.1	Tomato	cytosol	42.38	42.67
Solyc09g005410.1.1	Tomato	cytosol	38.41	42.65
Bra007947.1-P	Field mustard	cytosol	44.37	42.41
CDY03713	Canola	cytosol	43.05	42.21
Solyc09g014550.2.1	Tomato	cytosol	42.38	42.11
PGSC0003DMT400021868	Potato	cytosol	41.72	42.0
PGSC0003DMT400041446	Potato	cytosol	41.72	42.0
PGSC0003DMT400073915	Potato	cytosol	42.38	41.83
PGSC0003DMT400025420	Potato	cytosol	41.72	41.72
AT1G70860.2	Thale cress	cytosol	20.53	41.33
Bra012362.1-P	Field mustard	cytosol	43.71	41.25
CDY12484	Canola	cytosol	43.71	41.25
PGSC0003DMT400022721	Potato	cytosol	41.72	41.18
PGSC0003DMT400021866	Potato	cytosol	41.06	40.79
PGSC0003DMT400025429	Potato	cytosol	40.4	40.67
VIT_01s0011g05130.t01	Wine grape	cytosol	40.4	40.4
AT5G28010.2	Thale cress	cytosol	44.37	40.36
PGSC0003DMT400025419	Potato	cytosol	35.1	40.15
CDY09499	Canola	cytosol	36.42	40.15
Solyc09g014580.2.1	Tomato	cytosol	40.4	40.13
Solyc09g014530.2.1	Tomato	cytosol, extracellular	39.74	40.0
Solyc07g008710.2.1	Tomato	cytosol, extracellular, nucleus	41.72	39.62
Bra016179.1-P	Field mustard	cytosol	38.41	39.46
KRH13946	Soybean	cytosol	40.4	39.35
Solyc09g014560.1.1	Tomato	cytosol	19.21	39.19
PGSC0003DMT400073916	Potato	cytosol	31.13	39.17
Solyc05g046160.1.1	Tomato	cytosol	16.56	39.06
AT1G70880.1	Thale cress	cytosol	41.06	38.99
PGSC0003DMT400021867	Potato	cytosol	39.07	38.82
KRH37979	Soybean	cytosol	39.74	38.71
Bra016178.1-P	Field mustard	cytosol	40.4	38.61
Bra016180.1-P	Field mustard	cytosol	35.1	38.41
Bra012361.1-P	Field mustard	cytosol	35.1	38.13
AT1G23130.1	Thale cress	cytosol	40.4	38.12
CDX72753	Canola	cytosol	39.74	37.97
VIT_01s0011g05070.t01	Wine grape	cytosol	18.54	37.84
CDX72752	Canola	cytosol	34.44	37.68
PGSC0003DMT400004549	Potato	cytosol	37.75	37.5
Solyc05g046220.1.1	Tomato	cytosol	23.84	37.5
Solyc01g081130.2.1	Tomato	cytosol	18.54	36.84
AT5G28000.1	Thale cress	cytosol	39.74	36.59
CDX96283	Canola	cytosol	33.11	36.23
CDY00801	Canola	cytosol	42.38	36.16
KRH13944	Soybean	cytosol	33.11	35.71
Bra016181.1-P	Field mustard	cytosol	32.45	35.51
Bra016182.1-P	Field mustard	cytosol	48.34	35.1
PGSC0003DMT400091938	Potato	cytosol	35.76	34.84
Bra016362.1-P	Field mustard	cytosol	37.09	34.78
CDY12480	Canola	cytosol	37.09	34.78
CDY41463	Canola	cytosol	37.09	34.78
AT1G35260.1	Thale cress	cytosol	33.77	33.55
Bra024564.1-P	Field mustard	cytosol	40.4	33.52
CDY21418	Canola	cytosol	40.4	33.52
CDX89696	Canola	cytosol	33.11	33.11
CDY70076	Canola	cytosol	31.79	33.1
CDY12482	Canola	cytosol	27.15	32.8
Bra012364.1-P	Field mustard	cytosol	34.44	32.7
CDY25772	Canola	cytosol	34.44	32.7
Solyc09g014540.1.1	Tomato	cytosol	21.85	32.67
PGSC0003DMT400059724	Potato	cytosol	46.36	32.41
Bra007945.1-P	Field mustard	cytosol	49.01	32.31
CDY03718	Canola	cytosol	49.01	32.31
CDY09492	Canola	cytosol	48.34	31.88
CDY68859	Canola	cytosol	30.46	31.72
CDY17433	Canola	cytosol	31.13	31.13
CDY25771	Canola	cytosol	32.45	30.82
AT1G35310.1	Thale cress	cytosol	30.46	30.46
Bra012363.1-P	Field mustard	cytosol	31.79	29.81
Bra002309.1-P	Field mustard	cytosol	26.49	29.63
CDY16542	Canola	cytosol	26.49	29.63
CDX96282	Canola	cytosol	23.18	28.69
PGSC0003DMT400044158	Potato	cytosol	27.15	28.47
CDX92456	Canola	cytosol	25.17	28.15
Bra007949.1-P	Field mustard	cytosol	46.36	27.78
CDY11541	Canola	cytosol	25.17	24.52
PGSC0003DMT400020053	Potato	cytosol	47.68	24.32
AT1G70850.1	Thale cress	cytosol	50.33	24.05
PGSC0003DMT400075928	Potato	cytosol	47.02	23.91
AT1G70830.1	Thale cress	cytosol	48.34	21.79

Protein Annotations

EntrezGene:100262819	wikigene:100262819	Gene3D:3.30.530.20	MapMan:35.1	InterPro:Bet_v_I/MLP	ProteinID:CCB50818
ProteinID:CCB50818.1	UniProt:F6HFG9	EMBL:FN595752	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0009607	InterPro:IPR023393	EntrezGene:LOC100262819	wikigene:LOC100262819	PFAM:PF00407	PANTHER:PTHR31907
PANTHER:PTHR31907:SF4	SMART:SM01037	SUPFAM:SSF55961	InterPro:START-like_dom_sf	TIGR:TC51935	TIGR:TC65275
UniParc:UPI00015C8732	ArrayExpress:VIT_01s0011g05190	EnsemblPlantsGene:VIT_01s0011g05190	EnsemblPlants:VIT_01s0011g05190.t01	RefSeq:XP_002284578	RefSeq:XP_002284578.1
RefSeq:XP_003631203	RefSeq:XP_003631203.1	RefSeq:XP_019074860.1	:	:	:

Description

No Description!

Coordinates

chr1:+:4828442..4841849

Molecular Weight (calculated)

17081.6 Da

IEP (calculated)

5.878

GRAVY (calculated)

-0.212

Length

151 amino acids

Sequence
(BLAST)

001: MGLVGKLEAE ILILAPADKF HEVWGGRPHH MSSVSPGKIQ KVDLHEGDWG TVGSVIEWSY VIDGKNHVAK EIVEAIDKEN KAVTFKVIEG DLLKEYKSFK
101: AIVQTISKGE TTWVRWTFEY EKLNKEISTP VKLLGFVIHM NEELDDHLIQ A

Best Arabidopsis Sequence Match ( AT1G70830.3 )
(BLAST)

001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEEEEVAHPE TLLQFCVEVS KEIDEHLLAE
201: E

Arabidopsis Description

MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.