Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96283 | Canola | cytosol | 64.78 | 74.64 |
| Bra016181.1-P | Field mustard | cytosol | 64.15 | 73.91 |
| Bra016180.1-P | Field mustard | cytosol | 63.52 | 73.19 |
| AT1G70860.2 | Thale cress | cytosol | 33.96 | 72.0 |
| CDX72752 | Canola | cytosol | 62.26 | 71.74 |
| AT1G70890.1 | Thale cress | cytosol | 62.26 | 62.66 |
| AT1G70840.1 | Thale cress | cytosol | 65.41 | 60.82 |
| AT5G28010.2 | Thale cress | cytosol | 56.6 | 54.22 |
| AT1G23130.1 | Thale cress | cytosol | 51.57 | 51.25 |
| AT5G28000.1 | Thale cress | cytosol | 52.83 | 51.22 |
| AT1G35260.1 | Thale cress | cytosol | 44.03 | 46.05 |
| AT1G35310.1 | Thale cress | cytosol | 43.4 | 45.7 |
| KRH13947 | Soybean | cytosol | 42.14 | 43.23 |
| KRH37979 | Soybean | cytosol | 42.14 | 43.23 |
| VIT_01s0011g05150.t01 | Wine grape | cytosol | 37.11 | 42.75 |
| VIT_01s0011g05170.t01 | Wine grape | cytosol | 16.98 | 42.19 |
| VIT_01s0011g05190.t01 | Wine grape | cytosol | 38.99 | 41.06 |
| VIT_01s0011g05180.t01 | Wine grape | cytosol | 38.36 | 40.4 |
| Solyc05g046140.2.1 | Tomato | endoplasmic reticulum, extracellular | 34.59 | 36.67 |
| PGSC0003DMT400075925 | Potato | cytosol | 26.42 | 36.21 |
| PGSC0003DMT400025429 | Potato | cytosol | 33.96 | 36.0 |
| PGSC0003DMT400073915 | Potato | cytosol | 34.59 | 35.95 |
| PGSC0003DMT400022721 | Potato | cytosol | 34.59 | 35.95 |
| Solyc05g046160.1.1 | Tomato | cytosol | 14.47 | 35.94 |
| Solyc09g005500.2.1 | Tomato | extracellular | 33.96 | 35.76 |
| PGSC0003DMT400031386 | Potato | cytosol | 33.96 | 35.76 |
| PGSC0003DMT400041455 | Potato | cytosol | 33.96 | 35.76 |
| PGSC0003DMT400056811 | Potato | cytosol | 28.93 | 35.66 |
| Solyc01g081130.2.1 | Tomato | cytosol | 16.98 | 35.53 |
| KRH13946 | Soybean | cytosol | 34.59 | 35.48 |
| PGSC0003DMT400031542 | Potato | cytosol | 33.96 | 35.29 |
| PGSC0003DMT400022679 | Potato | cytosol | 33.33 | 35.1 |
| PGSC0003DMT400041449 | Potato | cytosol | 25.16 | 35.09 |
| PGSC0003DMT400073916 | Potato | cytosol | 26.42 | 35.0 |
| Solyc09g014530.2.1 | Tomato | cytosol, extracellular | 32.7 | 34.67 |
| Solyc04g007830.2.1 | Tomato | cytosol | 28.93 | 34.33 |
| AT1G70850.1 | Thale cress | cytosol | 67.92 | 34.18 |
| PGSC0003DMT400021868 | Potato | cytosol | 32.08 | 34.0 |
| Solyc09g005400.2.1 | Tomato | cytosol | 32.08 | 34.0 |
| Solyc07g008710.2.1 | Tomato | cytosol, extracellular, nucleus | 33.96 | 33.96 |
| PGSC0003DMT400077743 | Potato | cytosol | 32.08 | 33.77 |
| Solyc09g014550.2.1 | Tomato | cytosol | 32.08 | 33.55 |
| Solyc09g014580.2.1 | Tomato | cytosol | 32.08 | 33.55 |
| Solyc05g046150.2.1 | Tomato | cytosol, extracellular | 31.45 | 33.33 |
| PGSC0003DMT400021866 | Potato | cytosol | 31.45 | 32.89 |
| PGSC0003DMT400021867 | Potato | cytosol | 31.45 | 32.89 |
| PGSC0003DMT400025419 | Potato | cytosol | 27.04 | 32.58 |
| Solyc09g005420.2.1 | Tomato | cytosol | 30.19 | 32.0 |
| PGSC0003DMT400025420 | Potato | cytosol | 30.19 | 31.79 |
| KRH13944 | Soybean | cytosol | 27.67 | 31.43 |
| Solyc05g046220.1.1 | Tomato | cytosol | 18.87 | 31.25 |
| PGSC0003DMT400091938 | Potato | cytosol | 30.19 | 30.97 |
| Solyc09g005410.1.1 | Tomato | cytosol | 26.42 | 30.88 |
| AT1G70830.1 | Thale cress | cytosol | 64.78 | 30.75 |
| PGSC0003DMT400041446 | Potato | cytosol | 28.93 | 30.67 |
| PGSC0003DMT400004549 | Potato | cytosol | 28.93 | 30.26 |
| Solyc09g014560.1.1 | Tomato | cytosol | 13.84 | 29.73 |
| Solyc09g014540.1.1 | Tomato | cytosol | 17.61 | 27.72 |
| PGSC0003DMT400059724 | Potato | cytosol | 35.85 | 26.39 |
| AT1G70870.1 | Thale cress | cytosol | 22.64 | 25.9 |
| PGSC0003DMT400044158 | Potato | cytosol | 22.64 | 25.0 |
| PGSC0003DMT400020053 | Potato | cytosol | 35.85 | 19.26 |
| AT1G23120.2 | Thale cress | vacuole | 23.9 | 19.19 |
| PGSC0003DMT400075928 | Potato | cytosol | 35.22 | 18.86 |
Protein Annotations
| Gene3D:3.30.530.20 | MapMan:35.1 | EntrezGene:843425 | ProteinID:AEE35133.1 | EMBL:AK117636 | ArrayExpress:AT1G70880 |
| EnsemblPlantsGene:AT1G70880 | RefSeq:AT1G70880 | TAIR:AT1G70880 | RefSeq:AT1G70880-TAIR-G | EnsemblPlants:AT1G70880.1 | TAIR:AT1G70880.1 |
| EMBL:BT005397 | InterPro:Bet_v_I/MLP | ProteinID:CAC83598.1 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0008150 |
| GO:GO:0009607 | InterPro:IPR023393 | RefSeq:NP_177244.1 | PFAM:PF00407 | PO:PO:0009005 | PANTHER:PTHR31907 |
| PANTHER:PTHR31907:SF4 | UniProt:Q941R7 | SMART:SM01037 | SUPFAM:SSF55961 | InterPro:START-like_dom_sf | UniParc:UPI000000C630 |
Description
Major latex-like protein [Source:UniProtKB/TrEMBL;Acc:Q941R7]
Coordinates
chr1:-:26722846..26723978
Molecular Weight (calculated)
17861.8 Da
IEP (calculated)
4.435
GRAVY (calculated)
-0.502
Length
159 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEEASSLVG IVETTVELKS SVEKFHDLLV GRPHHMSNAT PSNIQSAELQ EGEMGQVGAV ILWNYVHDGE AKSAKQRIES LDPEKNRITY RVVEGDLLKE
101: YTSFVTTFQV TPKEGEPGSV AHWHFEYEKI NEEVAHPETL LQLATEVSKD MDEHLLSEE
101: YTSFVTTFQV TPKEGEPGSV AHWHFEYEKI NEEVAHPETL LQLATEVSKD MDEHLLSEE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.