Skip to main content
crop-pal logo
Potato
Search for another protein from :
Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
PGSC0003DMT400030176
PGSC0003DMT400030222
PGSC0003DMT400055428

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G70830.1 PGSC0003DMT400030176 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400030222 AT5G43080.1 20706207
AT1G70830.1 PGSC0003DMT400055428 AT5G43080.1 20706207
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g046150.2.1 Tomato cytosol, extracellular 76.16 76.67
PGSC0003DMT400075925 Potato cytosol 52.32 68.1
PGSC0003DMT400059724 Potato cytosol 73.51 51.39
PGSC0003DMT400022679 Potato cytosol 47.02 47.02
PGSC0003DMT400041455 Potato cytosol 45.7 45.7
PGSC0003DMT400031542 Potato cytosol 44.37 43.79
PGSC0003DMT400077743 Potato cytosol 43.71 43.71
VIT_01s0011g05150.t01 Wine grape cytosol 39.74 43.48
PGSC0003DMT400056811 Potato cytosol 37.09 43.41
VIT_01s0011g05190.t01 Wine grape cytosol 43.05 43.05
VIT_01s0011g05180.t01 Wine grape cytosol 43.05 43.05
PGSC0003DMT400073915 Potato cytosol 43.05 42.48
CDY12485 Canola cytosol 27.81 42.42
VIT_01s0011g05170.t01 Wine grape cytosol 17.88 42.19
PGSC0003DMT400021866 Potato cytosol 42.38 42.11
PGSC0003DMT400022721 Potato cytosol 42.38 41.83
PGSC0003DMT400073916 Potato cytosol 33.11 41.67
KRH13947 Soybean cytosol 42.38 41.29
PGSC0003DMT400021867 Potato cytosol 39.74 39.47
PGSC0003DMT400021868 Potato cytosol 39.07 39.33
AT1G70890.1 Thale cress cytosol 40.4 38.61
PGSC0003DMT400075928 Potato cytosol 74.83 38.05
Bra007946.1-P Field mustard cytosol 34.44 37.96
PGSC0003DMT400025419 Potato cytosol 33.11 37.88
CDY65619 Canola cytosol 41.06 37.8
PGSC0003DMT400025420 Potato cytosol 37.75 37.75
PGSC0003DMT400020053 Potato cytosol 73.51 37.5
AT1G70840.1 Thale cress cytosol 42.38 37.43
KRH37979 Soybean cytosol 38.41 37.42
PGSC0003DMT400025429 Potato cytosol 37.09 37.33
CDY03715 Canola cytosol 40.4 37.2
Bra016364.1-P Field mustard cytosol 38.41 36.94
CDY41465 Canola cytosol 38.41 36.94
PGSC0003DMT400004549 Potato cytosol 37.09 36.84
CDY23474 Canola cytosol 39.74 36.81
Bra003939.1-P Field mustard cytosol 39.74 36.81
PGSC0003DMT400091938 Potato cytosol 37.75 36.77
AT5G28010.2 Thale cress cytosol 40.4 36.75
CDY09495 Canola cytosol 38.41 36.71
CDX68328 Canola cytosol 39.74 36.59
CDX91696 Canola cytosol 37.75 36.31
KRH13946 Soybean cytosol 37.09 36.13
Bra007947.1-P Field mustard cytosol 37.75 36.08
AT5G28000.1 Thale cress cytosol 39.07 35.98
PGSC0003DMT400041449 Potato cytosol 27.15 35.96
Bra012362.1-P Field mustard cytosol 37.75 35.62
PGSC0003DMT400041446 Potato cytosol 35.1 35.33
Bra012361.1-P Field mustard cytosol 31.79 34.53
CDY12484 Canola cytosol 36.42 34.38
CDY09499 Canola cytosol 31.13 34.31
AT1G70880.1 Thale cress cytosol 35.76 33.96
AT1G35260.1 Thale cress cytosol 33.77 33.55
Bra016179.1-P Field mustard cytosol 32.45 33.33
Bra016178.1-P Field mustard cytosol 34.44 32.91
CDY03713 Canola cytosol 33.11 32.47
CDX72753 Canola cytosol 33.77 32.28
CDX89696 Canola cytosol 31.79 31.79
PGSC0003DMT400044158 Potato cytosol 29.8 31.25
CDY41463 Canola cytosol 33.11 31.06
Bra016362.1-P Field mustard cytosol 33.11 31.06
CDY12480 Canola cytosol 33.11 31.06
AT1G23130.1 Thale cress cytosol 32.45 30.62
CDY21418 Canola cytosol 36.42 30.22
Bra024564.1-P Field mustard cytosol 36.42 30.22
KRH13944 Soybean cytosol 27.81 30.0
CDY00801 Canola cytosol 35.1 29.94
CDY17433 Canola cytosol 29.8 29.8
Bra016180.1-P Field mustard cytosol 27.15 29.71
CDY70076 Canola cytosol 28.48 29.66
CDY12482 Canola cytosol 24.5 29.6
AT1G70860.2 Thale cress cytosol 14.57 29.33
Bra016182.1-P Field mustard cytosol 40.4 29.33
Bra016181.1-P Field mustard cytosol 26.49 28.99
CDX72752 Canola cytosol 26.49 28.99
CDX96283 Canola cytosol 26.49 28.99
Bra012364.1-P Field mustard cytosol 30.46 28.93
CDY25772 Canola cytosol 30.46 28.93
AT1G35310.1 Thale cress cytosol 28.48 28.48
CDY68859 Canola cytosol 25.83 26.9
CDY16542 Canola cytosol 23.84 26.67
CDY03718 Canola cytosol 40.4 26.64
Bra007945.1-P Field mustard cytosol 40.4 26.64
CDY09492 Canola cytosol 40.4 26.64
CDY25771 Canola cytosol 27.15 25.79
Bra012363.1-P Field mustard cytosol 27.15 25.47
Bra002309.1-P Field mustard cytosol 22.52 25.19
CDX92456 Canola cytosol 21.85 24.44
Bra007949.1-P Field mustard cytosol 35.76 21.43
CDX96282 Canola cytosol 16.56 20.49
AT1G70850.1 Thale cress cytosol 41.72 19.94
CDY11541 Canola cytosol 18.54 18.06
AT1G70830.1 Thale cress cytosol 39.07 17.61
Protein Annotations
EnsemblPlants:PGSC0003DMT400031386EnsemblPlantsGene:PGSC0003DMG400012031Gene3D:3.30.530.20GO:GO:0006950GO:GO:0006952GO:GO:0008150
GO:GO:0009607InterPro:Bet_v_I/MLPInterPro:IPR023393InterPro:START-like_dom_sfPANTHER:PTHR31907PANTHER:PTHR31907:SF4
PFAM:PF00407PGSC:PGSC0003DMG400012031SEG:segSMART:SM01037SUPFAM:SSF55961UniParc:UPI0002964171
UniProt:M1AVL1MapMan:35.1::::
Description
Major latex [Source:PGSC_GENE;Acc:PGSC0003DMG400012031]
Coordinates
chr4:+:2393615..2394286
Molecular Weight (calculated)
17645.4 Da
IEP (calculated)
6.029
GRAVY (calculated)
-0.419
Length
151 amino acids
Sequence
(BLAST)
001: MSLEVRKLVS EINIKCDGDV FHEMIRYEPH HISRICSDKI QNVDIHEGEL GTIGSVKSWK LIHDGKEIMA KEVIEEIDDE KKLIKKKIIE GDLLEYYKSF
101: YITMHVETKG ENNLVTWIME YVKKNANVPD PHTLMELCIN VTKDIETHHL K
Best Arabidopsis Sequence Match ( AT1G70830.5 )
(BLAST)
001: MADVATKHPM EDEVKKTEAS SLVGKLETDV EIKASADKFH HMFAGKPHHV SKASPGNIQG CDLHEGDWGT VGSIVFWNYV HDGEAKVAKE RIEAVEPDKN
101: LITFRVIEGD LMKEYKSFLL TIQVTPKPGG PGSIVHWHLE YEKISEEVAH PETLLQFCVE VSKEIDEHLL AEE
Arabidopsis Description
MLP28MLP-like protein 28 [Source:UniProtKB/Swiss-Prot;Acc:Q9SSK9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.