Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 7
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX93615 | Canola | mitochondrion | 100.0 | 98.63 |
| Bra031595.1-P | Field mustard | mitochondrion | 95.83 | 94.52 |
| AT1G07830.1 | Thale cress | mitochondrion | 93.06 | 93.06 |
| VIT_17s0000g07870.t01 | Wine grape | mitochondrion | 75.69 | 77.86 |
| KRH63372 | Soybean | mitochondrion | 75.0 | 75.52 |
| KRH54532 | Soybean | mitochondrion | 73.61 | 74.65 |
| PGSC0003DMT400062909 | Potato | mitochondrion | 71.53 | 72.54 |
| GSMUA_Achr2P09960_001 | Banana | mitochondrion | 75.0 | 72.48 |
| GSMUA_Achr4P30490_001 | Banana | mitochondrion | 72.22 | 71.72 |
| Zm00001d045500_P001 | Maize | mitochondrion | 67.36 | 70.29 |
| EER87761 | Sorghum | mitochondrion | 69.44 | 68.49 |
| TraesCS7A01G060200.1 | Wheat | mitochondrion | 64.58 | 67.39 |
| TraesCS4A01G429200.1 | Wheat | mitochondrion | 64.58 | 65.03 |
| TraesCS3B01G098500.1 | Wheat | mitochondrion | 65.28 | 64.83 |
| TraesCS7D01G054700.1 | Wheat | mitochondrion | 63.89 | 63.45 |
| Solyc03g114050.2.1 | Tomato | plastid | 70.83 | 56.04 |
| HORVU7Hr1G011290.1 | Barley | mitochondrion, plastid | 64.58 | 45.59 |
| Zm00001d045001_P001 | Maize | nucleus | 38.89 | 43.08 |
Protein Annotations
| Gene3D:1.20.1280.190 | MapMan:17.7.1.1.25 | EnsemblPlantsGene:Bra018681 | EnsemblPlants:Bra018681.1 | EnsemblPlants:Bra018681.1-P | GO:GO:0003674 |
| GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0005761 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR038340 | UniProt:M4DQ88 | InterPro:MRP-L47_sf |
| PFAM:PF06984 | PANTHER:PTHR21183 | InterPro:Ribosomal_L29/L35 | InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L47_mit | SUPFAM:SSF46561 |
| TIGRFAMs:TIGR00012 | UniParc:UPI000253EDE5 | SEG:seg | : | : | : |
Description
AT1G07830 (E=5e-065) | ribosomal protein L29 family protein
Coordinates
chrA06:+:2641924..2642790
Molecular Weight (calculated)
16913.7 Da
IEP (calculated)
10.739
GRAVY (calculated)
-0.558
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MFITRFVGRR FLAVAASARS ESTTAAAAST VKIAKNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD PRRSAEMKRM VNAM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD PRRSAEMKRM VNAM
001: MFLTRFVGRR FLAAASARSE STTAAAAAST IRTPTNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMQ
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
Arabidopsis Description
At1g07830/F24B9_7 [Source:UniProtKB/TrEMBL;Acc:Q94JQ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.