Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P09960_001 | Banana | mitochondrion | 86.21 | 83.89 |
| VIT_17s0000g07870.t01 | Wine grape | mitochondrion | 78.62 | 81.43 |
| PGSC0003DMT400062909 | Potato | mitochondrion | 77.24 | 78.87 |
| KRH63372 | Soybean | mitochondrion | 77.24 | 78.32 |
| KRH54532 | Soybean | mitochondrion | 75.17 | 76.76 |
| Bra031595.1-P | Field mustard | mitochondrion | 75.17 | 74.66 |
| CDY22718 | Canola | mitochondrion | 75.17 | 74.15 |
| CDY06281 | Canola | mitochondrion | 72.41 | 73.43 |
| Zm00001d045500_P001 | Maize | mitochondrion | 69.66 | 73.19 |
| Bra018681.1-P | Field mustard | mitochondrion | 71.72 | 72.22 |
| EER87761 | Sorghum | mitochondrion | 72.41 | 71.92 |
| CDX93615 | Canola | mitochondrion | 72.41 | 71.92 |
| AT1G07830.1 | Thale cress | mitochondrion | 71.03 | 71.53 |
| TraesCS7A01G060200.1 | Wheat | mitochondrion | 66.9 | 70.29 |
| TraesCS4A01G429200.1 | Wheat | mitochondrion | 67.59 | 68.53 |
| TraesCS3B01G098500.1 | Wheat | mitochondrion | 68.28 | 68.28 |
| TraesCS7D01G054700.1 | Wheat | mitochondrion | 67.59 | 67.59 |
| Solyc03g114050.2.1 | Tomato | plastid | 75.17 | 59.89 |
| HORVU7Hr1G011290.1 | Barley | mitochondrion, plastid | 65.52 | 46.57 |
| Zm00001d045001_P001 | Maize | nucleus | 37.93 | 42.31 |
Protein Annotations
| Gene3D:1.20.1280.190 | MapMan:17.7.1.1.25 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005761 | GO:GO:0005840 |
| GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0019538 |
| EnsemblPlantsGene:GSMUA_Achr4G30490_001 | EnsemblPlants:GSMUA_Achr4P30490_001 | EnsemblPlants:GSMUA_Achr4T30490_001 | InterPro:IPR038340 | UniProt:M0STG1 | InterPro:MRP-L47_sf |
| PFAM:PF06984 | PANTHER:PTHR21183 | InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L47_mit | SUPFAM:SSF46561 | UniParc:UPI00029546CD |
| SEG:seg | : | : | : | : | : |
Description
39S ribosomal protein L47, mitochondrial precursor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G30490_001]
Coordinates
chr4:-:28051989..28054117
Molecular Weight (calculated)
16678.3 Da
IEP (calculated)
10.607
GRAVY (calculated)
-0.510
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MLVSRVLGRV LCAASKSESF ATSAAAAAAD SARRAHNPLE EFFEVDRSTD EEKPVVYGRG WKASELRLKS WDDLQKLWYV LLKEKNLLMS QRQMLHAQNL
101: RFPNPERVPK VRKSMCRIKH VLTERAIAEP DPRRSAEMKR MINAL
101: RFPNPERVPK VRKSMCRIKH VLTERAIAEP DPRRSAEMKR MINAL
001: MFLTRFVGRR FLAAASARSE STTAAAAAST IRTPTNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMQ
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
Arabidopsis Description
At1g07830/F24B9_7 [Source:UniProtKB/TrEMBL;Acc:Q94JQ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.