Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G054700.1 | Wheat | mitochondrion | 65.69 | 92.41 |
| TraesCS4A01G429200.1 | Wheat | mitochondrion | 64.22 | 91.61 |
| TraesCS7A01G060200.1 | Wheat | mitochondrion | 61.76 | 91.3 |
| TraesCS3B01G098500.1 | Wheat | mitochondrion | 64.71 | 91.03 |
| Zm00001d045500_P001 | Maize | mitochondrion | 53.92 | 79.71 |
| EER87761 | Sorghum | mitochondrion | 56.37 | 78.77 |
| VIT_17s0000g07870.t01 | Wine grape | mitochondrion | 46.08 | 67.14 |
| KRH63372 | Soybean | mitochondrion | 47.06 | 67.13 |
| KRH54532 | Soybean | mitochondrion | 46.57 | 66.9 |
| CDY06281 | Canola | mitochondrion | 46.57 | 66.43 |
| Bra031595.1-P | Field mustard | mitochondrion | 47.06 | 65.75 |
| GSMUA_Achr4P30490_001 | Banana | mitochondrion | 46.57 | 65.52 |
| PGSC0003DMT400062909 | Potato | mitochondrion | 45.59 | 65.49 |
| CDY22718 | Canola | mitochondrion | 47.06 | 65.31 |
| GSMUA_Achr2P09960_001 | Banana | mitochondrion | 47.55 | 65.1 |
| Bra018681.1-P | Field mustard | mitochondrion | 45.59 | 64.58 |
| AT1G07830.1 | Thale cress | mitochondrion | 45.1 | 63.89 |
| CDX93615 | Canola | mitochondrion | 45.59 | 63.7 |
| Solyc03g114050.2.1 | Tomato | plastid | 45.59 | 51.1 |
| Zm00001d045001_P001 | Maize | nucleus | 27.94 | 43.85 |
Protein Annotations
| Gene3D:1.20.1280.190 | MapMan:17.7.1.1.25 | UniProt:A0A287VI95 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005761 |
| GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0019538 | EnsemblPlantsGene:HORVU7Hr1G011290 | EnsemblPlants:HORVU7Hr1G011290.1 | InterPro:IPR038340 | InterPro:MRP-L47_sf | PFAM:PF06984 |
| PANTHER:PTHR21183 | InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L47_mit | SUPFAM:SSF46561 | UniParc:UPI000B47CF25 | SEG:seg |
Description
No Description!
Coordinates
chrchr7H:-:15856722..15859585
Molecular Weight (calculated)
23501.5 Da
IEP (calculated)
11.607
GRAVY (calculated)
-0.734
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: NKKALNRPDS LPSWSKSGPE PICFGSKPLF PFPWIGPSRR RRPARRHLLF PRRDPSRFRS AMLSLSRTLA RRLFSTAPEG ASAAASTSVA RKAQNPLEEF
101: FEVERSTADD QPAPHYGRGW KASELRLKSW DDLHKLWYVL LKEKNMLMSQ RQMLASESMG FPNPERISKV KRSMCRIKHV LTERAIADPD PRRTAEMKRM
201: INAM
101: FEVERSTADD QPAPHYGRGW KASELRLKSW DDLHKLWYVL LKEKNMLMSQ RQMLASESMG FPNPERISKV KRSMCRIKHV LTERAIADPD PRRTAEMKRM
201: INAM
001: MFLTRFVGRR FLAAASARSE STTAAAAAST IRTPTNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMQ
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
Arabidopsis Description
At1g07830/F24B9_7 [Source:UniProtKB/TrEMBL;Acc:Q94JQ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.