Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d045500_P001 | Maize | mitochondrion | 47.69 | 44.93 |
| EER87761 | Sorghum | mitochondrion | 47.69 | 42.47 |
| VIT_17s0000g07870.t01 | Wine grape | mitochondrion | 44.62 | 41.43 |
| TraesCS7A01G060200.1 | Wheat | mitochondrion | 43.85 | 41.3 |
| KRH54532 | Soybean | mitochondrion | 43.85 | 40.14 |
| PGSC0003DMT400062909 | Potato | mitochondrion | 43.85 | 40.14 |
| KRH63372 | Soybean | mitochondrion | 43.85 | 39.86 |
| TraesCS4A01G429200.1 | Wheat | mitochondrion | 43.08 | 39.16 |
| Bra018681.1-P | Field mustard | mitochondrion | 43.08 | 38.89 |
| TraesCS3B01G098500.1 | Wheat | mitochondrion | 43.08 | 38.62 |
| TraesCS7D01G054700.1 | Wheat | mitochondrion | 43.08 | 38.62 |
| CDY06281 | Canola | mitochondrion | 42.31 | 38.46 |
| CDX93615 | Canola | mitochondrion | 43.08 | 38.36 |
| Bra031595.1-P | Field mustard | mitochondrion | 43.08 | 38.36 |
| CDY22718 | Canola | mitochondrion | 43.08 | 38.1 |
| GSMUA_Achr4P30490_001 | Banana | mitochondrion | 42.31 | 37.93 |
| GSMUA_Achr2P09960_001 | Banana | mitochondrion | 43.08 | 37.58 |
| AT1G07830.1 | Thale cress | mitochondrion | 41.54 | 37.5 |
| Solyc03g114050.2.1 | Tomato | plastid | 43.85 | 31.32 |
| HORVU7Hr1G011290.1 | Barley | mitochondrion, plastid | 43.85 | 27.94 |
Protein Annotations
| Gene3D:1.20.1280.190 | MapMan:17.7.1.1.25 | UniProt:A0A1D6NSS3 | ProteinID:AQL01294.1 | GO:GO:0003674 | GO:GO:0003735 |
| GO:GO:0005198 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 |
| GO:GO:0005761 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0019538 | InterPro:IPR038340 | InterPro:MRP-L47_sf | PFAM:PF06984 | PANTHER:PTHR21183 |
| InterPro:Ribosomal_L29/L35 | InterPro:Ribosomal_L29/L35_sf | InterPro:Ribosomal_L47_mit | SUPFAM:SSF46561 | TIGRFAMs:TIGR00012 | UniParc:UPI000843ED66 |
| EnsemblPlantsGene:Zm00001d045001 | EnsemblPlants:Zm00001d045001_P001 | EnsemblPlants:Zm00001d045001_T001 | SEG:seg | : | : |
Description
ribosomal protein L29 family protein
Coordinates
chr9:-:9720824..9722131
Molecular Weight (calculated)
15337.6 Da
IEP (calculated)
12.220
GRAVY (calculated)
-1.190
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MWYVLLKEKN MLMTQRQMLQ SDGFPNPERI SKVKKSMCRI KHVLTERAIA EPDPRRSSEM KRMINAVLFR DDADHRRAPP RRRRGWWRWC RRRRRRADPG
101: VPAPPHHQGR GWSGGGASRP DGHGSHPLRS
101: VPAPPHHQGR GWSGGGASRP DGHGSHPLRS
001: MFLTRFVGRR FLAAASARSE STTAAAAAST IRTPTNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMQ
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM
Arabidopsis Description
At1g07830/F24B9_7 [Source:UniProtKB/TrEMBL;Acc:Q94JQ7]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.