CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045500_P001	Maize	mitochondrion	89.04	94.2
TraesCS7A01G060200.1	Wheat	mitochondrion	78.77	83.33
TraesCS3B01G098500.1	Wheat	mitochondrion	80.82	81.38
TraesCS4A01G429200.1	Wheat	mitochondrion	78.08	79.72
TraesCS7D01G054700.1	Wheat	mitochondrion	78.77	79.31
KRH63372	Soybean	mitochondrion	73.29	74.83
KRH54532	Soybean	mitochondrion	72.6	74.65
GSMUA_Achr2P09960_001	Banana	mitochondrion	76.03	74.5
VIT_17s0000g07870.t01	Wine grape	mitochondrion	71.23	74.29
PGSC0003DMT400062909	Potato	mitochondrion	70.55	72.54
GSMUA_Achr4P30490_001	Banana	mitochondrion	71.92	72.41
CDY06281	Canola	mitochondrion	69.18	70.63
Bra031595.1-P	Field mustard	mitochondrion	69.86	69.86
Bra018681.1-P	Field mustard	mitochondrion	68.49	69.44
CDY22718	Canola	mitochondrion	69.18	68.71
CDX93615	Canola	mitochondrion	68.49	68.49
AT1G07830.1	Thale cress	mitochondrion	67.12	68.06
HORVU7Hr1G011290.1	Barley	mitochondrion, plastid	78.77	56.37
Solyc03g114050.2.1	Tomato	plastid	69.86	56.04
Zm00001d045001_P001	Maize	nucleus	42.47	47.69

Protein Annotations

Gene3D:1.20.1280.190	MapMan:17.7.1.1.25	EntrezGene:8069044	UniProt:C5Z380	EnsemblPlants:EER87761	ProteinID:EER87761
ProteinID:EER87761.1	GO:GO:0003674	GO:GO:0003735	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005761	GO:GO:0005762	GO:GO:0005840
GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0019538
GO:GO:0032543	InterPro:IPR038340	InterPro:MRP-L47_sf	PFAM:PF06984	PANTHER:PTHR21183	InterPro:Ribosomal_L29/L35_sf
InterPro:Ribosomal_L47_mit	EnsemblPlantsGene:SORBI_3010G018000	SUPFAM:SSF46561	UniParc:UPI0001A88E8C	RefSeq:XP_002436394.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:+:1490301..1494432

Molecular Weight (calculated)

16847.4 Da

IEP (calculated)

10.684

GRAVY (calculated)

-0.685

Length

146 amino acids

Sequence
(BLAST)

001: MLSLSRALGR RLFSSAAAAA SESAAAASTS AVRKAQNPLE EFFEVERSTE EDKPPPHYGR SWKASELRLK SWDDLQKLWY VLLKEKNMLM TQRQMLHSEN
101: MRFPNPERIS KVKKSMCRIK HVLTERAIAE PDPRRSSEMK RMINAL

Best Arabidopsis Sequence Match ( AT1G07830.1 )
(BLAST)

001: MFLTRFVGRR FLAAASARSE STTAAAAAST IRTPTNPLEE FFEFDRSQDE DKPVVYGRGW KASELRLKSW DDLQKLWYVL LKEKNMLMTQ RQMLQAQNMQ
101: FPNPERIPKV RRSMCRIKHV LTERAIEEPD SRRSAEMKRM VNGM

Arabidopsis Description

At1g07830/F24B9_7 [Source:UniProtKB/TrEMBL;Acc:Q94JQ7]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.