Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- plasma membrane 2
- extracellular 2
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028920.1-P | Field mustard | endoplasmic reticulum, extracellular, plastid | 30.93 | 29.13 |
| GSMUA_Achr1P00030_001 | Banana | golgi, plasma membrane, vacuole | 39.18 | 11.14 |
| Bra036508.1-P | Field mustard | extracellular | 10.31 | 9.17 |
| Bra021420.1-P | Field mustard | plastid | 39.18 | 9.11 |
| TraesCS1B01G181600.1 | Wheat | plasma membrane | 36.08 | 8.95 |
| TraesCS1D01G161800.1 | Wheat | plasma membrane, plastid, vacuole | 36.08 | 8.95 |
| TraesCS1A01G164700.1 | Wheat | plastid | 36.08 | 8.91 |
| EER94017 | Sorghum | plastid | 36.08 | 8.43 |
| HORVU1Hr1G043730.13 | Barley | mitochondrion, plastid | 36.08 | 8.16 |
| Zm00001d032604_P001 | Maize | plasma membrane | 36.08 | 7.54 |
Protein Annotations
Description
AT3G02690 (E=7e-011) | integral membrane family protein
Coordinates
chrA02:-:27843064..27843357
Molecular Weight (calculated)
10871.6 Da
IEP (calculated)
4.809
GRAVY (calculated)
0.758
Length
97 amino acids
Sequence
(BLAST)
(BLAST)
1: MLHAAQSMAI GTVMVRWVSK HSDPIMATGW VMMLYPYSFC SMACFTEFQL DEVNLLFLLT VGLVCTQLER EVGCSCLGLG RQSIFYGLFV DPLVFGF
001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND
Arabidopsis Description
WAT1-related protein At3g02690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V85]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.