Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31931 | Canola | extracellular | 99.08 | 93.1 |
| Bra028920.1-P | Field mustard | endoplasmic reticulum, extracellular, plastid | 44.95 | 47.57 |
| VIT_04s0069g01000.t01 | Wine grape | golgi, plasma membrane, plastid | 55.96 | 21.86 |
| Bra021420.1-P | Field mustard | plastid | 75.23 | 19.66 |
| GSMUA_Achr1P00030_001 | Banana | golgi, plasma membrane, vacuole | 57.8 | 18.48 |
| TraesCS1B01G181600.1 | Wheat | plasma membrane | 58.72 | 16.37 |
| TraesCS1D01G161800.1 | Wheat | plasma membrane, plastid, vacuole | 58.72 | 16.37 |
| TraesCS1A01G164700.1 | Wheat | plastid | 57.8 | 16.03 |
| EER94017 | Sorghum | plastid | 59.63 | 15.66 |
| PGSC0003DMT400055258 | Potato | plastid | 60.55 | 15.6 |
| Solyc02g036470.2.1 | Tomato | plastid | 59.63 | 15.48 |
| KRG98057 | Soybean | plastid | 56.88 | 15.05 |
| KRH30722 | Soybean | plastid | 56.88 | 15.05 |
| HORVU1Hr1G043730.13 | Barley | mitochondrion, plastid | 58.72 | 14.92 |
| Zm00001d032604_P001 | Maize | plasma membrane | 58.72 | 13.79 |
| Bra031800.1-P | Field mustard | cytosol, extracellular, plastid | 9.17 | 10.31 |
Protein Annotations
| EnsemblPlants:Bra036508.1 | EnsemblPlants:Bra036508.1-P | EnsemblPlantsGene:Bra036508 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:EamA_dom | PANTHER:PTHR22911 | PANTHER:PTHR22911:SF60 | PFAM:PF00892 | SUPFAM:SSF103481 | TMHMM:TMhelix |
| UniParc:UPI0002540E49 | UniProt:M4F5Z9 | MapMan:35.1 | : | : | : |
Description
AT3G02690 (E=4e-036) | integral membrane family protein
Coordinates
chrA07:+:13172..13684
Molecular Weight (calculated)
11915.6 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.588
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQLKFHLHH MVIGGLPLLT ISGINHDLVN GSLQELSTND IIALLYTSIF GSVVSYDVYF YSATKDHLIF LTPMFASIFG YLHLDETFSS LQLGGAAVTL
101: VAIPSKRLG
101: VAIPSKRLG
001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND
Arabidopsis Description
WAT1-related protein At3g02690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V85]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.