Factsheet for Solyc02g036470.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc02g071920.2.1
Solyc03g005980.2.1
Solyc07g066170.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02690.1	Solyc02g071920.2.1	AT4G19030.1	21798944
AT3G02690.1	Solyc03g005980.2.1	AT4G19030.1	21798944
AT3G02690.1	Solyc07g066170.2.1	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055258	Potato	plastid	94.29	93.62
VIT_04s0069g01000.t01	Wine grape	golgi, plasma membrane, plastid	55.24	83.15
GSMUA_Achr1P00030_001	Banana	golgi, plasma membrane, vacuole	58.81	72.43
KRG98057	Soybean	plastid	63.81	65.05
KRH30722	Soybean	plastid	62.86	64.08
TraesCS1D01G161800.1	Wheat	plasma membrane, plastid, vacuole	57.62	61.89
TraesCS1B01G181600.1	Wheat	plasma membrane	57.14	61.38
AT3G02690.1	Thale cress	plastid	60.48	60.91
TraesCS1A01G164700.1	Wheat	plastid	56.9	60.81
Bra036508.1-P	Field mustard	extracellular	15.48	59.63
CDY31931	Canola	extracellular	15.95	57.76
EER94017	Sorghum	plastid	56.67	57.35
HORVU1Hr1G043730.13	Barley	mitochondrion, plastid	56.67	55.48
Zm00001d032604_P001	Maize	plasma membrane	54.76	49.57
CDY55106	Canola	extracellular, golgi, mitochondrion, plastid	3.57	30.0

Protein Annotations

EnsemblPlants:Solyc02g036470.2.1	EnsemblPlantsGene:Solyc02g036470.2	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	InterPro:EamA_dom	PANTHER:PTHR22911
PANTHER:PTHR22911:SF60	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI00027678F7
UniProt:K4B5U0	MapMan:24.2.1.5	:	:	:	:

Description

No Description!

Coordinates

chr2:-:30806456..30811496

Molecular Weight (calculated)

45539.1 Da

IEP (calculated)

5.337

GRAVY (calculated)

0.434

Length

420 amino acids

Sequence
(BLAST)

001: MAWSPFSSSS TPLCSSLTRN PTNSLCKTSS LCHHYSLNHS RGEFLQYPNT ISFKNLHFRT KKFTACSRTE SGVEQNSPPS SSELDCVGTG LDVECVVNPS
101: EEFPKDSNLR FQDEGVSSME LLQTILEWVL LISPFFFWGT AMVAMKEVLP KTGPFFVSSF RLIPAGLMLV GFAASRGRNL PSGFNAWLSI TLFAVVDATC
201: FQGFLAEGLQ RTSAGLGSVI IDSQPLTVAV LAALLFGESI GSVGAAGLVL GVIGLLLLEV PALSFDNSNF SIWGSGEWWM FLAAQSMAVG TVMVRWVSKY
301: SDPVMATGWH MVIGGLPLVA ISILNHEPVI SGSLMELTTN DLLALLYTSI FGSAISYGVY FYNATRGSLT KLSSLTFLTP MFASIFGFLY LDEIFTPVQL
401: IGAFVTVAAI YMVNYKSDTK

Best Arabidopsis Sequence Match ( AT3G02690.1 )
(BLAST)

001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND

Arabidopsis Description

WAT1-related protein At3g02690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.