Factsheet for HORVU1Hr1G043730.13

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 2
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G081800.3
HORVU5Hr1G071910.1
HORVU7Hr1G048940.3
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G02690.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT3G02690.1	HORVU2Hr1G081800.3	AT4G26455.1	21798944
AT3G02690.1	HORVU5Hr1G071910.1	AT4G26455.1	21798944
AT3G02690.1	HORVU7Hr1G048940.3	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G181600.1	Wheat	plasma membrane	77.62	85.17
TraesCS1D01G161800.1	Wheat	plasma membrane, plastid, vacuole	77.16	84.65
TraesCS1A01G164700.1	Wheat	plastid	77.16	84.22
VIT_04s0069g01000.t01	Wine grape	golgi, plasma membrane, plastid	48.25	74.19
GSMUA_Achr1P00030_001	Banana	golgi, plasma membrane, vacuole	56.64	71.26
EER94017	Sorghum	plastid	68.76	71.08
Bra028920.1-P	Field mustard	endoplasmic reticulum, extracellular, plastid	16.55	68.93
Zm00001d032604_P001	Maize	plasma membrane	66.9	61.85
Bra036508.1-P	Field mustard	extracellular	14.92	58.72
CDY31931	Canola	extracellular	15.38	56.9
KRG98057	Soybean	plastid	54.55	56.8
Solyc02g036470.2.1	Tomato	plastid	55.48	56.67
PGSC0003DMT400055258	Potato	plastid	55.48	56.26
KRH30722	Soybean	plastid	53.85	56.07
Bra021420.1-P	Field mustard	plastid	54.31	55.88
CDY53736	Canola	plastid	53.85	55.53
AT3G02690.1	Thale cress	plastid	53.38	54.92
Bra031800.1-P	Field mustard	cytosol, extracellular, plastid	8.16	36.08
CDY55106	Canola	extracellular, golgi, mitochondrion, plastid	3.03	26.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G043730.13	EnsemblPlantsGene:HORVU1Hr1G043730	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	InterPro:EamA_dom	PANTHER:PTHR22911
PANTHER:PTHR22911:SF60	PFAM:PF00892	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI000B476F04
UniProt:A0A287FC11	MapMan:24.2.1.5	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:318084537..318093968

Molecular Weight (calculated)

45419.4 Da

IEP (calculated)

9.148

GRAVY (calculated)

0.389

Length

429 amino acids

Sequence
(BLAST)

001: ETHPRRSSLS SRRAGRCRGR LSTRRITAAP RPSAGRQAAM STTAPFRLLL PLHPPLTPRR PSAPVLPFVP RRGTVPSLRL RLRLAAGGGE TPPPAADELD
101: CVGTGTDVEC VVDDGPGAEE GVAPALAGRE WWEWVSLVSP FFFWGTAMVA MKGVIPKTGP FFVAALRLLP AGALVVAFAS ARGRKQPSGW AAWGAIAAFG
201: LIDAACFQQG FLTEGLQKTS AGLGSVIIDS QPLTVAILAA LFFGESIGAI GVGGLLLGVV GLLLLEVPAL SVEGNNTSVW GSGEWWMFLS AQSMAVGTIM
301: VRWVSKYSDP IMATGWHMVL GGIPLLVISV LNHDPALNGH IQELTWSDIA ALGYTSIFGS AVSYGVYFYN ATRGSLTTLS SLTFLTPMFA SIFGFLYLGE
401: TFAPEQIGGA LLTLVAIYMV NYKSIIGEK

Best Arabidopsis Sequence Match ( AT3G02690.1 )
(BLAST)

001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND

Arabidopsis Description

WAT1-related protein At3g02690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.