CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036508.1-P	Field mustard	extracellular	93.1	99.08
VIT_04s0069g01000.t01	Wine grape	golgi, plasma membrane, plastid	54.31	22.58
CDY53736	Canola	plastid	73.28	20.43
GSMUA_Achr1P00030_001	Banana	golgi, plasma membrane, vacuole	56.03	19.06
TraesCS1B01G181600.1	Wheat	plasma membrane	56.9	16.88
TraesCS1D01G161800.1	Wheat	plasma membrane, plastid, vacuole	56.9	16.88
TraesCS1A01G164700.1	Wheat	plastid	56.03	16.54
EER94017	Sorghum	plastid	57.76	16.14
PGSC0003DMT400055258	Potato	plastid	58.62	16.08
Solyc02g036470.2.1	Tomato	plastid	57.76	15.95
KRG98057	Soybean	plastid	55.17	15.53
KRH30722	Soybean	plastid	55.17	15.53
HORVU1Hr1G043730.13	Barley	mitochondrion, plastid	56.9	15.38
Zm00001d032604_P001	Maize	plasma membrane	56.9	14.22
CDY55106	Canola	extracellular, golgi, mitochondrion, plastid	4.31	10.0

Protein Annotations

EnsemblPlants:CDY31931	EnsemblPlantsGene:GSBRNA2T00050707001	GO:A0A078H2A6	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:EamA_dom	PANTHER:PTHR22911	PANTHER:PTHR22911:SF60	PFAM:PF00892	ProteinID:CDY31931	ProteinID:CDY31931.1
SUPFAM:SSF103481	TMHMM:TMhelix	UniParc:UPI0004EE5160	UniProt:A0A078H2A6	MapMan:35.1	:

Description

BnaA07g00640DBnaA07g00640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2A6]

Coordinates

chrLK032283:+:6557..7069

Molecular Weight (calculated)

12649.5 Da

IEP (calculated)

6.798

GRAVY (calculated)

0.628

Length

116 amino acids

Sequence
(BLAST)

001: MSQLKFHLHH MVIGGLPLLT ISGINHDLVN GSLQELSTND IIALLYTSIF GSVVSYDVYF YSATKGSILM PSYHLIFLTP MFASIFGYLH LDETFSSLQL
101: GGAAVTLVAI PSKRLG

Best Arabidopsis Sequence Match ( AT3G02690.1 )
(BLAST)

001: MEWPWSAIAA SSSSSSSCFF ASPNSCLSIT RRTNLSCVNT SVKSLRHSRF DSKHNLVKRR INGDSVVRRS TTSNNSTEET ESSSSSSSVD CVGMGSDVEC
101: VNNGEDEENR SSGILSGGEG TFLEWTVLIS PFFFWGTAMV AMKEVLPITG PFFVAAFRLI PAGLLLVAFA VYKGRPLPEG INAWFSIALF ALVDATCFQG
201: FLAQGLQRTS AGLGSVIIDS QPLTVAVLAS FLFGESIGIV RAGGLLLGVA GLLLLEVPSV TSDGNNFSLW GSGEWWMLLA AQSMAIGTVM VRWVSKYSDP
301: IMATGWHMVI GGLPLLAISV INHDPVFNGS LQDLSTNDVI ALLYTSIFGS AVSYGVYFYS ATKGSLTKLS SLTFLTPMFA SIFGYLYLNE TFSSLQLVGA
401: AVTLVAIYLV NFPEGND

Arabidopsis Description

WAT1-related protein At3g02690, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q93V85]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.