Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024058.1-P | Field mustard | nucleus | 100.0 | 64.53 |
| CDY39225 | Canola | nucleus | 87.79 | 57.5 |
| Bra011204.1-P | Field mustard | nucleus | 54.2 | 34.3 |
| AT4G30630.1 | Thale cress | nucleus | 56.49 | 31.22 |
| Bra006793.1-P | Field mustard | mitochondrion, nucleus | 32.82 | 26.22 |
| VIT_11s0037g00390.t01 | Wine grape | nucleus | 33.59 | 18.64 |
| Bra002685.1-P | Field mustard | nucleus | 27.48 | 18.56 |
| Bra020404.1-P | Field mustard | nucleus | 26.72 | 17.16 |
| KRH72318 | Soybean | cytosol | 32.82 | 16.6 |
| KRH03036 | Soybean | nucleus | 32.06 | 16.34 |
| Solyc07g005690.2.1 | Tomato | cytosol | 34.35 | 15.1 |
| PGSC0003DMT400028944 | Potato | cytosol | 34.35 | 15.0 |
| Solyc12g009970.1.1 | Tomato | nucleus | 30.53 | 13.51 |
| PGSC0003DMT400020258 | Potato | nucleus | 29.01 | 12.88 |
Protein Annotations
Description
AT4G30630 (E=2e-010) | unknown protein
Coordinates
chrScaffold002146:+:45..539
Molecular Weight (calculated)
14426.2 Da
IEP (calculated)
7.928
GRAVY (calculated)
-0.653
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRLSESGGD VKVTTSGKRK KHSGPCFDLK RKDTVCNDSA RSRGNEVLTP LPDLNDNTLV VSSKVSGFDL NLVSREEEEE PEGNGEATKK AMIGNGIDCE
101: LKLPICRDVE KEISRAVKRK VSWQDPVALR V
101: LKLPICRDVE KEISRAVKRK VSWQDPVALR V
001: MKKTNFVSSA SGGDPMIRLT FVQVLELEKE LEIKRKRLEM IKQKRLTLKS EVRFLRRRYE HLKQDQTLET SPEMLRLSES GGLEVPRKPS GERKKQSGVR
101: ASVPCFDLKL KNTICNEKEA LANNVASCDL DKKRKRSRGS DVLTFPVSLP DLNGEGNTSG TDKVPGFDLN QISREEEEPE VNGEHMVAEA MKNAMLDNRI
201: SDLHVERKLP ICGDVEKELN RAVKRKVTWQ DPVALSV
101: ASVPCFDLKL KNTICNEKEA LANNVASCDL DKKRKRSRGS DVLTFPVSLP DLNGEGNTSG TDKVPGFDLN QISREEEEPE VNGEHMVAEA MKNAMLDNRI
201: SDLHVERKLP ICGDVEKELN RAVKRKVTWQ DPVALSV
Arabidopsis Description
At4g30630 [Source:UniProtKB/TrEMBL;Acc:Q9M097]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.