Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX91492 | Canola | cytosol | 16.13 | 9.62 |
| KRG90492 | Soybean | nucleus | 22.58 | 8.75 |
| CDY10455 | Canola | cytosol | 41.94 | 4.01 |
| CDY40345 | Canola | cytosol | 41.94 | 4.01 |
| CDX80812 | Canola | mitochondrion | 19.35 | 4.0 |
| CDX86661 | Canola | extracellular | 9.68 | 3.49 |
| KRG90493 | Soybean | cytosol | 19.35 | 2.91 |
| CDY13124 | Canola | cytosol | 19.35 | 2.12 |
| CDY36977 | Canola | cytosol | 19.35 | 2.12 |
| CDY15481 | Canola | cytosol | 19.35 | 2.07 |
| CDX86663 | Canola | cytosol | 19.35 | 2.06 |
| CDX86662 | Canola | nucleus | 3.23 | 0.32 |
Protein Annotations
| EnsemblPlants:CDX80811 | EnsemblPlantsGene:GSBRNA2T00134199001 | ProteinID:CDX80811 | ProteinID:CDX80811.1 | UniParc:UPI0004EE1384 | MapMan:35.2 |
Description
BnaC03g00650D
Coordinates
chrLK031823:-:330610..330705
Molecular Weight (calculated)
3444.0 Da
IEP (calculated)
10.312
GRAVY (calculated)
-0.200
Length
31 amino acids
Sequence
(BLAST)
(BLAST)
1: MLNNGWAAGR LHSTIAGSED HFVFSSNRVL R
001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR
Arabidopsis Description
ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.