CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027530.1-P	Field mustard	cytosol	97.88	100.0
CDY36977	Canola	cytosol	99.29	99.29
AT5G44110.1	Thale cress	cytosol	91.87	92.2
CDX86663	Canola	cytosol	85.16	82.82
CDY15481	Canola	cytosol	84.45	82.41
PGSC0003DMT400026695	Potato	cytosol	75.97	75.17
Solyc09g066470.2.1	Tomato	cytosol	74.91	74.13
VIT_07s0005g03680.t01	Wine grape	plastid	74.91	72.85
KRH19580	Soybean	cytosol	74.56	71.28
HORVU6Hr1G088850.1	Barley	cytosol	71.73	69.76
TraesCS6A01G377900.1	Wheat	cytosol	71.38	69.42
TraesCS6B01G415600.1	Wheat	cytosol	71.38	69.42
EES07729	Sorghum	cytosol	72.08	69.15
TraesCS6D01G362400.1	Wheat	cytosol	69.26	57.99
CDX80812	Canola	mitochondrion	29.33	55.33
GSMUA_Achr7P16770_001	Banana	cytosol, extracellular, plasma membrane	56.54	54.61
CDX86661	Canola	extracellular	15.55	51.16
CDY10455	Canola	cytosol	53.71	46.91
CDY40345	Canola	cytosol	53.71	46.91
CDX80811	Canola	mitochondrion, nucleus, plastid	2.12	19.35
CDX86662	Canola	nucleus	13.07	11.71
CDX91492	Canola	cytosol	1.77	9.62

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078FJG9	UniProt:A0A078FJG9	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
EnsemblPlants:CDY13124	ProteinID:CDY13124	ProteinID:CDY13124.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00070977001	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0004EF138E	SEG:seg	:	:	:

Description

BnaA09g16930DBnaA09g16930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FJG9]

Coordinates

chrLK032031:+:710273..712261

Molecular Weight (calculated)

31532.2 Da

IEP (calculated)

7.181

GRAVY (calculated)

-0.141

Length

283 amino acids

Sequence
(BLAST)

001: MAEKDAMARS DGAIRVSGMQ FSYDVQDPIF FDFSLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN IVQVLNRSAF HDTDLVCSGD LSYLGGSWSK
101: TAGSAGEIPL QGDFSAEHMI FGVEGIDPVR REKLIDLLDI NLKWRMHKVS DGQRRRVQIC MGLLQPFKVL LLDEVTVDLD VVARMDLLEF FKEECEQRGA
201: TIVYATHIFD GLETWASHLA YIHGGELKLS AKLKEIKDLE TSPNLLSVVE NWLRSETKVE KKTKKKPVAT SPFMSSRQMA YYR

Best Arabidopsis Sequence Match ( AT5G44110.1 )
(BLAST)

001: MAEKNASAVD GAIRVSGMQF SYDVQDPIFF DFNLDLPAGS RCLLVGANGS GKTTLLKILA GKHMVGGKNV VQVLDRSAFH DTELVCSGDL SYLGGSWSKT
101: AGSAGDIPLQ GDFSAEHMIF GVEGIDPFRR EKLIDLLDIN LQWRMHKVSD GQRRRVQICM GLLHPFKVLL LDEVTVDLDV VARMDLLEFF KEECEQRGAT
201: IVYATHIFDG LETWASHLAY INGGELKLSA KLDEIKDLKT SPNLLSVVEA WLRSETKVEK KTKKKPVVTS PFMSSRQMAY YR

Arabidopsis Description

ABCI21ABC transporter I family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.