Factsheet for HORVU6Hr1G088850.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G415600.1	Wheat	cytosol	95.53	95.53
TraesCS6A01G377900.1	Wheat	cytosol	95.19	95.19
EES07729	Sorghum	cytosol	89.35	88.14
TraesCS6D01G362400.1	Wheat	cytosol	90.72	78.11
AT1G03905.1	Thale cress	cytosol	75.26	75.52
Solyc09g066470.2.1	Tomato	cytosol	73.54	74.83
PGSC0003DMT400026695	Potato	cytosol	73.54	74.83
Bra030549.1-P	Field mustard	cytosol	74.57	74.57
CDX86663	Canola	cytosol	74.57	74.57
CDY15481	Canola	cytosol	74.23	74.48
VIT_07s0005g03680.t01	Wine grape	plastid	74.23	74.23
AT5G44110.1	Thale cress	cytosol	71.82	74.11
KRH19580	Soybean	cytosol	74.57	73.31
Bra027530.1-P	Field mustard	cytosol	69.76	73.29
CDY36977	Canola	cytosol	70.1	72.08
CDY13124	Canola	cytosol	69.76	71.73
GSMUA_Achr7P16770_001	Banana	cytosol, extracellular, plasma membrane	57.39	57.0
HORVU4Hr1G052430.1	Barley	plastid	48.11	34.83

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	EMBL:AK355286	UniProt:F2CUI4
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787
GO:GO:0016887	EnsemblPlantsGene:HORVU6Hr1G088850	EnsemblPlants:HORVU6Hr1G088850.1	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005
PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0000D8969F
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CUI4]

Coordinates

chrchr6H:+:567543782..567547855

Molecular Weight (calculated)

32615.1 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.246

Length

291 amino acids

Sequence
(BLAST)

001: MAGGEEGWRR SGIEVSTLQF GYDGEAPLFA RFNLRVAPGS RCLLVGANGS GKTTLLKILA GKHMVGGKDV VRVLNGSAFH DTQFVCSGDL SYLGGSWSRT
101: VSSVGDVPLQ GDFSAEHMIF GVDGVDPVRR DKLIDLLDID LQWRMHKVSD GQRRRVQICM GLLHPYKVLL LDEITVDLDV VTRMDLLDFF KEECEQREAT
201: IVYATHIFDG LETWATDIAY IQEGELKRSA KYSDIEELKT AKNLLSVVES WLKSETKLPK KEPALVETQP RRPSPFDASP FRASRHMAYY R

Best Arabidopsis Sequence Match ( AT1G03905.1 )
(BLAST)

001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR

Arabidopsis Description

ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.