Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026695 | Potato | cytosol | 95.1 | 95.1 |
| Bra027530.1-P | Field mustard | cytosol | 74.13 | 76.53 |
| CDY36977 | Canola | cytosol | 74.48 | 75.27 |
| VIT_07s0005g03680.t01 | Wine grape | plastid | 76.57 | 75.26 |
| AT5G44110.1 | Thale cress | cytosol | 74.13 | 75.18 |
| CDY13124 | Canola | cytosol | 74.13 | 74.91 |
| KRH19580 | Soybean | cytosol | 76.57 | 73.99 |
| AT1G03905.1 | Thale cress | cytosol | 74.83 | 73.79 |
| HORVU6Hr1G088850.1 | Barley | cytosol | 74.83 | 73.54 |
| TraesCS6A01G377900.1 | Wheat | cytosol | 74.48 | 73.2 |
| Bra030549.1-P | Field mustard | cytosol | 74.13 | 72.85 |
| TraesCS6B01G415600.1 | Wheat | cytosol | 74.13 | 72.85 |
| CDY15481 | Canola | cytosol | 73.78 | 72.76 |
| EES07729 | Sorghum | cytosol | 74.83 | 72.54 |
| CDX86663 | Canola | cytosol | 73.78 | 72.51 |
| TraesCS6D01G362400.1 | Wheat | cytosol | 71.68 | 60.65 |
| GSMUA_Achr7P16770_001 | Banana | cytosol, extracellular, plasma membrane | 54.2 | 52.9 |
| Solyc01g100850.2.1 | Tomato | cytosol | 50.7 | 44.21 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 |
| UniProt:K4CUS2 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFscan:PS50893 | PANTHER:PTHR12847 | PANTHER:PTHR12847:SF6 |
| SMART:SM00382 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc09g066470.2 | EnsemblPlants:Solyc09g066470.2.1 | UniParc:UPI000276AD65 | SEG:seg |
Description
No Description!
Coordinates
chr9:-:64889991..64893834
Molecular Weight (calculated)
32007.6 Da
IEP (calculated)
6.603
GRAVY (calculated)
-0.193
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGESSSIQV NGMQFSYDFQ SPIYFDFNLN VAPRSRCLLL GANGSGKTTL LKILAGKHMV GGKDVVRVLN LSAFHDTHLV CSGDLAYLGE SWSKNVGAVG
101: DIPLQGDFSA EHMIFGVEGV DPVRREKLIE LLDIDLQWRM HKVSDGQRRR VQICMGLLHP YKVLLMDEVT VDLDVVARMD LLDFFKEECE QRGATIVYAT
201: HIFDGLETWA TDLVYIQEGV LKRTEKLPEL PELKSSPNLL SVVENWLRSE TPIEKKKPAP APAKAQKSSP FGSSPFQSSR HMSHYR
101: DIPLQGDFSA EHMIFGVEGV DPVRREKLIE LLDIDLQWRM HKVSDGQRRR VQICMGLLHP YKVLLMDEVT VDLDVVARMD LLDFFKEECE QRGATIVYAT
201: HIFDGLETWA TDLVYIQEGV LKRTEKLPEL PELKSSPNLL SVVENWLRSE TPIEKKKPAP APAKAQKSSP FGSSPFQSSR HMSHYR
001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
Arabidopsis Description
ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.