Factsheet for GSMUA_Achr7P16770_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07729	Sorghum	cytosol	58.36	57.97
AT5G44110.1	Thale cress	cytosol	55.63	57.8
Bra027530.1-P	Field mustard	cytosol	54.61	57.76
TraesCS6A01G377900.1	Wheat	cytosol	57.0	57.39
HORVU6Hr1G088850.1	Barley	cytosol	57.0	57.39
TraesCS6B01G415600.1	Wheat	cytosol	56.66	57.04
CDY13124	Canola	cytosol	54.61	56.54
KRH19580	Soybean	cytosol	57.0	56.42
CDY36977	Canola	cytosol	54.27	56.18
AT1G03905.1	Thale cress	cytosol	54.95	55.52
VIT_07s0005g03680.t01	Wine grape	plastid	54.95	55.33
Bra030549.1-P	Field mustard	cytosol	54.61	54.98
CDY15481	Canola	cytosol	54.27	54.83
CDX86663	Canola	cytosol	53.92	54.3
PGSC0003DMT400026695	Potato	cytosol	52.9	54.2
Solyc09g066470.2.1	Tomato	cytosol	52.9	54.2
TraesCS6D01G362400.1	Wheat	cytosol	56.66	49.11
GSMUA_Achr3P08390_001	Banana	cytosol	39.93	34.93

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSMUA_Achr7G16770_001
EnsemblPlants:GSMUA_Achr7P16770_001	EnsemblPlants:GSMUA_Achr7T16770_001	InterPro:IPR003439	UniProt:M0TI64	InterPro:P-loop_NTPase	PFAM:PF00005
PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000295FE75
SEG:seg	:	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr7G16770_001]

Coordinates

chr7:-:16979880..16996180

Molecular Weight (calculated)

32894.2 Da

IEP (calculated)

6.341

GRAVY (calculated)

0.157

Length

293 amino acids

Sequence
(BLAST)

001: MNCYHVMVHN RTHTEQKVCF AVRLSEAFAG VVFLLCVGKE VSGVEEMEGG GIEVSSLNFA YEGLPPLFTR FNLDVSPGSR CLLVGANGSG KTTLLKILAG
101: KHMVGGRDVV RVLNASAFHD TRLVCSGDLA YLGGSWSKTV GSAGDIPLQG DFSAEHMIFG VEGIDPARRE KLIDLLDINL QWRMHKVSDG QRRRVQICMG
201: LLYPYKVLLL DEVTVDLDVV TRMDLLEFFT EECEQAWLSK QQLALVILLF HLFSFSDVLQ SCCREELSLF MQPIFLMDWK HGQRMWHTSK MVI

Best Arabidopsis Sequence Match ( AT5G44110.1 )
(BLAST)

001: MAEKNASAVD GAIRVSGMQF SYDVQDPIFF DFNLDLPAGS RCLLVGANGS GKTTLLKILA GKHMVGGKNV VQVLDRSAFH DTELVCSGDL SYLGGSWSKT
101: AGSAGDIPLQ GDFSAEHMIF GVEGIDPFRR EKLIDLLDIN LQWRMHKVSD GQRRRVQICM GLLHPFKVLL LDEVTVDLDV VARMDLLEFF KEECEQRGAT
201: IVYATHIFDG LETWASHLAY INGGELKLSA KLDEIKDLKT SPNLLSVVEA WLRSETKVEK KTKKKPVVTS PFMSSRQMAY YR

Arabidopsis Description

ABCI21ABC transporter I family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF19]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.