Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY13124 | Canola | cytosol | 100.0 | 97.88 |
| AT5G44110.1 | Thale cress | cytosol | 93.86 | 92.2 |
| Bra030549.1-P | Field mustard | cytosol | 85.56 | 81.44 |
| PGSC0003DMT400026695 | Potato | cytosol | 77.62 | 75.17 |
| Solyc09g066470.2.1 | Tomato | cytosol | 76.53 | 74.13 |
| VIT_07s0005g03680.t01 | Wine grape | plastid | 76.53 | 72.85 |
| KRH19580 | Soybean | cytosol | 75.81 | 70.95 |
| HORVU6Hr1G088850.1 | Barley | cytosol | 73.29 | 69.76 |
| TraesCS6A01G377900.1 | Wheat | cytosol | 72.92 | 69.42 |
| TraesCS6B01G415600.1 | Wheat | cytosol | 72.92 | 69.42 |
| EES07729 | Sorghum | cytosol | 73.65 | 69.15 |
| TraesCS6D01G362400.1 | Wheat | cytosol | 70.76 | 57.99 |
| GSMUA_Achr7P16770_001 | Banana | cytosol, extracellular, plasma membrane | 57.76 | 54.61 |
| Bra009601.1-P | Field mustard | cytosol | 55.6 | 47.38 |
| Bra005714.1-P | Field mustard | cytosol | 43.32 | 39.87 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | EnsemblPlantsGene:Bra027530 | EnsemblPlants:Bra027530.1 |
| EnsemblPlants:Bra027530.1-P | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0008150 | GO:GO:0009628 | GO:GO:0010114 | GO:GO:0010218 | GO:GO:0016787 | GO:GO:0016887 |
| InterPro:IPR003439 | UniProt:M4EFG8 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFscan:PS50893 | PANTHER:PTHR12847 |
| PANTHER:PTHR12847:SF6 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI00025427CE | SEG:seg | : |
Description
AT5G44110 (E=4e-133) ATPOP1, ATNAP2, POP1 | POP1; transporter
Coordinates
chrA09:+:13542444..13544111
Molecular Weight (calculated)
30886.5 Da
IEP (calculated)
7.580
GRAVY (calculated)
-0.124
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSDGAIRV SGMQFSYDVQ DPIFFDFSLD LPAGSRCLLV GANGSGKTTL LKILAGKHMV GGKNIVQVLN RSAFHDTDLV CSGDLSYLGG SWSKTAGSAG
101: EIPLQGDFSA EHMIFGVEGI DPVRREKLID LLDINLKWRM HKVSDGQRRR VQICMGLLQP FKVLLLDEVT VDLDVVARMD LLEFFKEECE QRGATIVYAT
201: HIFDGLETWA SHLAYIHGGE LKLSAKLKEI KDLETSPNLL SVVENWLRSE TKVEKKTKKK PVATSPFMSS RQMAYYR
101: EIPLQGDFSA EHMIFGVEGI DPVRREKLID LLDINLKWRM HKVSDGQRRR VQICMGLLQP FKVLLLDEVT VDLDVVARMD LLEFFKEECE QRGATIVYAT
201: HIFDGLETWA SHLAYIHGGE LKLSAKLKEI KDLETSPNLL SVVENWLRSE TKVEKKTKKK PVATSPFMSS RQMAYYR
001: MAEKNASAVD GAIRVSGMQF SYDVQDPIFF DFNLDLPAGS RCLLVGANGS GKTTLLKILA GKHMVGGKNV VQVLDRSAFH DTELVCSGDL SYLGGSWSKT
101: AGSAGDIPLQ GDFSAEHMIF GVEGIDPFRR EKLIDLLDIN LQWRMHKVSD GQRRRVQICM GLLHPFKVLL LDEVTVDLDV VARMDLLEFF KEECEQRGAT
201: IVYATHIFDG LETWASHLAY INGGELKLSA KLDEIKDLKT SPNLLSVVEA WLRSETKVEK KTKKKPVVTS PFMSSRQMAY YR
101: AGSAGDIPLQ GDFSAEHMIF GVEGIDPFRR EKLIDLLDIN LQWRMHKVSD GQRRRVQICM GLLHPFKVLL LDEVTVDLDV VARMDLLEFF KEECEQRGAT
201: IVYATHIFDG LETWASHLAY INGGELKLSA KLDEIKDLKT SPNLLSVVEA WLRSETKVEK KTKKKPVVTS PFMSSRQMAY YR
Arabidopsis Description
ABCI21ABC transporter I family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF19]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.