Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15481 | Canola | cytosol | 99.31 | 99.66 |
| AT1G03905.1 | Thale cress | cytosol | 92.1 | 92.41 |
| Bra027530.1-P | Field mustard | cytosol | 81.44 | 85.56 |
| VIT_07s0005g03680.t01 | Wine grape | plastid | 77.32 | 77.32 |
| PGSC0003DMT400026695 | Potato | cytosol | 74.23 | 75.52 |
| HORVU6Hr1G088850.1 | Barley | cytosol | 74.57 | 74.57 |
| TraesCS6B01G415600.1 | Wheat | cytosol | 74.57 | 74.57 |
| TraesCS6A01G377900.1 | Wheat | cytosol | 74.23 | 74.23 |
| Solyc09g066470.2.1 | Tomato | cytosol | 72.85 | 74.13 |
| EES07729 | Sorghum | cytosol | 73.88 | 72.88 |
| KRH19580 | Soybean | cytosol | 73.54 | 72.3 |
| TraesCS6D01G362400.1 | Wheat | cytosol | 70.79 | 60.95 |
| GSMUA_Achr7P16770_001 | Banana | cytosol, extracellular, plasma membrane | 54.98 | 54.61 |
| Bra009601.1-P | Field mustard | cytosol | 52.92 | 47.38 |
| Bra005714.1-P | Field mustard | cytosol | 42.96 | 41.53 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC_transporter-like | EnsemblPlantsGene:Bra030549 | EnsemblPlants:Bra030549.1 |
| EnsemblPlants:Bra030549.1-P | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005524 |
| GO:GO:0016787 | GO:GO:0016887 | InterPro:IPR003439 | UniProt:M4EP29 | InterPro:P-loop_NTPase | PFAM:PF00005 |
| PFscan:PS50893 | PANTHER:PTHR12847 | PANTHER:PTHR12847:SF6 | SMART:SM00382 | SUPFAM:SSF52540 | UniParc:UPI00025458B4 |
| SEG:seg | : | : | : | : | : |
Description
AT1G03905 (E=4e-143) | ABC transporter family protein
Coordinates
chrA08:-:21371771..21373332
Molecular Weight (calculated)
32533.1 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.240
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAKDQATTS DDAIRVSGME FSYEAEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGIDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQNGELNRS SKMADISEMK TSPNLLSVVE SWLRSETKID KKKKKEPVPA WKPTPFDNSP FRSSRHMAYY R
101: TVGSAGEVPL QGDFSAEHMI FGVEGIDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQNGELNRS SKMADISEMK TSPNLLSVVE SWLRSETKID KKKKKEPVPA WKPTPFDNSP FRSSRHMAYY R
001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
Arabidopsis Description
ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.