CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026695	Potato	cytosol	74.66	77.27
Solyc09g066470.2.1	Tomato	cytosol	73.99	76.57
AT5G44110.1	Thale cress	cytosol	72.64	76.24
Bra027530.1-P	Field mustard	cytosol	70.95	75.81
VIT_07s0005g03680.t01	Wine grape	plastid	73.99	75.26
EES07729	Sorghum	cytosol	74.66	74.92
CDY36977	Canola	cytosol	71.62	74.91
AT1G03905.1	Thale cress	cytosol	73.31	74.83
HORVU6Hr1G088850.1	Barley	cytosol	73.31	74.57
CDY13124	Canola	cytosol	71.28	74.56
CDX86663	Canola	cytosol	72.3	73.54
Bra030549.1-P	Field mustard	cytosol	72.3	73.54
TraesCS6A01G377900.1	Wheat	cytosol	72.3	73.54
TraesCS6B01G415600.1	Wheat	cytosol	72.3	73.54
CDY15481	Canola	cytosol	71.96	73.45
TraesCS6D01G362400.1	Wheat	cytosol	70.27	61.54
GSMUA_Achr7P16770_001	Banana	cytosol, extracellular, plasma membrane	56.42	57.0
KRG90493	Soybean	cytosol	36.49	52.43
KRH33782	Soybean	cytosol	51.01	45.35
KRG90492	Soybean	nucleus	4.39	16.25

Protein Annotations

EntrezGene:100788503	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0GMF6	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
EMBL:ACUP02008191	EnsemblPlantsGene:GLYMA_13G124700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	EnsemblPlants:KRH19580	ProteinID:KRH19580
ProteinID:KRH19580.1	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6
SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI0000D8969B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr13:+:23809688..23813820

Molecular Weight (calculated)

32816.3 Da

IEP (calculated)

6.102

GRAVY (calculated)

-0.184

Length

296 amino acids

Sequence
(BLAST)

001: MNSSLSGNGG STTMAAENED SCGIRVTGMQ FSYDVQQPPL FLDFNLNVSP GSRCLLVGAN GSGKTTLLKI LAGKHMVGGR DVVRVLSGSA FHDTQLVCSG
101: DLAYLGGSWS KNVGSAGEIP LQGDFSAEHM IFGVEGADPE RRDKLIELLD IDLQWRMHKV SDGQRRRVQI CLGLLHPYKV LLLDEVTVDL DVVTRMDLLD
201: FFKEECEQRE AIIVYATHIF DGLETWATHL AYIQDGELRR AEKISNVKEL KSSTNLLSVV EAWLRAETKL EKKNPVQKTS VASSPFFSSR HMAYYR

Best Arabidopsis Sequence Match ( AT1G03905.1 )
(BLAST)

001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR

Arabidopsis Description

ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.