CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG90493	Soybean	cytosol	57.96	93.69
KRG90492	Soybean	nucleus	21.62	90.0
VIT_14s0060g00720.t01	Wine grape	cytosol	83.78	84.8
CDY40345	Canola	cytosol	80.78	83.02
Bra009601.1-P	Field mustard	cytosol	80.78	82.77
CDY10455	Canola	cytosol	80.18	82.41
PGSC0003DMT400007215	Potato	cytosol	79.58	80.55
Solyc01g100850.2.1	Tomato	cytosol	79.28	80.49
Os03t0316900-01	Rice	cytosol	76.28	79.38
TraesCS4D01G180700.1	Wheat	cytosol	73.57	78.78
TraesCS4A01G125500.1	Wheat	cytosol	73.57	78.78
GSMUA_Achr3P08390_001	Banana	cytosol	78.68	78.21
TraesCS4B01G179200.2	Wheat	cytosol	72.97	78.14
EER94951	Sorghum	cytosol	75.68	78.02
AT5G02270.2	Thale cress	cytosol	82.88	77.97
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	75.68	71.79
Bra005714.1-P	Field mustard	cytosol	64.26	71.1
HORVU4Hr1G052430.1	Barley	plastid	75.08	62.19
KRH19580	Soybean	cytosol	45.35	51.01

Protein Annotations

EntrezGene:100782386	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	EMBL:ACUP02006555
EnsemblPlantsGene:GLYMA_10G145200	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0016887	GO:GO:0080167	UniProt:I1LB20
InterPro:IPR003439	EnsemblPlants:KRH33782	ProteinID:KRH33782	ProteinID:KRH33782.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382	SUPFAM:SSF52540	UniParc:UPI000233C7D7
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:38005279..38008462

Molecular Weight (calculated)

37119.2 Da

IEP (calculated)

9.916

GRAVY (calculated)

-0.228

Length

333 amino acids

Sequence
(BLAST)

001: MAGKGTHSDS KAATIVIKDL RFTYPGIDGH PPPGSTPLIQ DFNLTLSSGH RCLLVGSNGA GKTTLLKILG GKHLVEPDMV RVLGRSAFHD TTLISSGDLC
101: YLGGEWRRDV AFAGFEVPIQ MDISAQKMIF GVPGIDPQRR AELIKVLDID LSWRLHKVSD GQRRRVQICM GLLKPFKVLL LDEITVDLDV LARADLLRFL
201: RKECDERGAT IIYATHIFDG LEDWPTNIVY VAHGKLQLAM PMDKVKEISK LSLMRTVESW LRKERDEDRK KRKERKAAGL PEFGKRVEES RVTGDPARAA
301: VRVINNGWAA GRLTSTVAGE ENFLLSSNRV LRQ

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.