Factsheet for HORVU4Hr1G052430.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G180700.1	Wheat	cytosol	76.87	99.36
TraesCS4A01G125500.1	Wheat	cytosol	76.87	99.36
TraesCS4B01G179200.2	Wheat	cytosol	76.37	98.71
Os03t0316900-01	Rice	cytosol	71.39	89.69
EER94951	Sorghum	cytosol	71.64	89.16
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	70.9	81.2
GSMUA_Achr3P08390_001	Banana	cytosol	63.43	76.12
VIT_14s0060g00720.t01	Wine grape	cytosol	61.94	75.68
Bra009601.1-P	Field mustard	cytosol	60.95	75.38
CDY10455	Canola	cytosol	60.7	75.31
CDY40345	Canola	cytosol	60.7	75.31
KRH33782	Soybean	cytosol	62.19	75.08
Solyc01g100850.2.1	Tomato	cytosol	59.95	73.48
PGSC0003DMT400007215	Potato	cytosol	59.95	73.25
AT5G02270.2	Thale cress	cytosol	61.69	70.06
Bra005714.1-P	Field mustard	cytosol	48.26	64.45
HORVU6Hr1G088850.1	Barley	cytosol	34.83	48.11

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287P1X9	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0009628
GO:GO:0016787	GO:GO:0016887	GO:GO:0080167	EnsemblPlantsGene:HORVU4Hr1G052430	EnsemblPlants:HORVU4Hr1G052430.1	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF5	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000B47A311	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:434506404..434509644

Molecular Weight (calculated)

44605.9 Da

IEP (calculated)

9.988

GRAVY (calculated)

-0.346

Length

402 amino acids

Sequence
(BLAST)

001: YTVLKTDLPS VANSGAPKPR RGPVLSLGSR IKSCLYRASH QPRPNNLNNR SLASFQHVGP LRYSRPVHQP KLTAPSSASD STSGHGEQSR TMAPTVEIRN
101: LTFTYPGIDG KPPPGAPPLI EDVCFSLEAG QRCLLVGSNG AGKTTILKIL GGKHMVDPSM VRVLGRSAFH DTALTSSGDL CYLGGEWRRD VAFAGYQVNI
201: QMDISAEKML FGVTGVDPQR RDELIKILDI DLTWRMHKAS DGQRRRVQIC MGLLKPFKVL LLDEITVDLD VLARANLLTY LKKECAEQGA TIIYATHIFD
301: GLDDWPTHIV YVAHGKLQLA LPLEKVKEMS QLSLMRTVER WLRKERDEDR RKRKERKEKG LPAFDKVIEG SRVVNNGWAA GRLTSTIAGE ENFSLSSNSV
401: LR

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.