CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40345	Canola	cytosol	99.07	99.07
Bra009601.1-P	Field mustard	cytosol	97.84	97.54
CDX80812	Canola	mitochondrion	39.81	86.0
AT5G02270.2	Thale cress	cytosol	92.9	85.03
VIT_14s0060g00720.t01	Wine grape	cytosol	83.33	82.07
KRH33782	Soybean	cytosol	82.41	80.18
TraesCS4A01G125500.1	Wheat	cytosol	75.0	78.14
EER94951	Sorghum	cytosol	77.78	78.02
TraesCS4B01G179200.2	Wheat	cytosol	74.69	77.81
TraesCS4D01G180700.1	Wheat	cytosol	74.69	77.81
Os03t0316900-01	Rice	cytosol	76.85	77.81
PGSC0003DMT400007215	Potato	cytosol	78.4	77.2
Solyc01g100850.2.1	Tomato	cytosol	78.09	77.13
GSMUA_Achr3P08390_001	Banana	cytosol	76.54	74.03
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	76.23	70.37
CDX91492	Canola	cytosol	10.19	63.46
HORVU4Hr1G052430.1	Barley	plastid	75.31	60.7
CDY13124	Canola	cytosol	46.91	53.71
CDY36977	Canola	cytosol	46.91	53.71
CDX86663	Canola	cytosol	47.53	52.92
CDY15481	Canola	cytosol	46.91	52.41
CDX80811	Canola	mitochondrion, nucleus, plastid	4.01	41.94
CDX86661	Canola	extracellular	11.11	41.86
CDX86662	Canola	nucleus	16.67	17.09

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078F7I3	UniProt:A0A078F7I3	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
EnsemblPlants:CDY10455	ProteinID:CDY10455	ProteinID:CDY10455.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	EnsemblPlantsGene:GSBRNA2T00032381001	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0004EDF703	SEG:seg	:	:	:

Description

BnaCnng03560DBnaCnng03560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F7I3]

Coordinates

chrLK032003:+:604906..607380

Molecular Weight (calculated)

36493.2 Da

IEP (calculated)

8.338

GRAVY (calculated)

-0.366

Length

324 amino acids

Sequence
(BLAST)

001: MEEEKRDTTV EISGLRFTYP GIDGHPPPGS KPLIEDFSLK LDSSERCLLV GSNGAGKTTI LKILGGKHMV EPHMVRVLGR SAFHDTGLTS SGDLCYLGGE
101: WRRDVAFAGF EVPIQMDISA EKMIFGVAGI DPKRRDELIK VLDIDISWRL HKVSDGQRRR VQICMGLLKP FKVLLLDEIT VDLDVLARAD LLAFLRKECQ
201: ERGATIIYAT HIFDGLEDWP THIVYVANGK LQLAMPMEKV KETSKKSLMR TVESWLRKER DEERKTRKER KANGLPEFET RAQESRVTGD PARMLNNGWA
301: AGRLHSTIAG GEDHFVLSSN RVLR

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.