Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- extracellular 3
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX80812 | Canola | mitochondrion | 30.23 | 17.33 |
| CDY15481 | Canola | cytosol | 54.65 | 16.21 |
| KRG90493 | Soybean | cytosol | 38.37 | 16.02 |
| CDY36977 | Canola | cytosol | 52.33 | 15.9 |
| CDX86663 | Canola | cytosol | 53.49 | 15.81 |
| CDY13124 | Canola | cytosol | 51.16 | 15.55 |
| CDY10455 | Canola | cytosol | 41.86 | 11.11 |
| CDY40345 | Canola | cytosol | 41.86 | 11.11 |
| CDX80811 | Canola | mitochondrion, nucleus, plastid | 3.49 | 9.68 |
| CDX86662 | Canola | nucleus | 11.63 | 3.16 |
| KRG90492 | Soybean | nucleus | 1.16 | 1.25 |
| CDX91492 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX86661 | EnsemblPlantsGene:GSBRNA2T00145329001 | PANTHER:PTHR12847 | PANTHER:PTHR12847:SF6 | ProteinID:CDX86661 | ProteinID:CDX86661.1 |
| UniParc:UPI0004EE016C | MapMan:35.1 | : | : | : | : |
Description
BnaC08g00420D
Coordinates
chrLK031846:+:1416431..1417456
Molecular Weight (calculated)
10152.9 Da
IEP (calculated)
10.843
GRAVY (calculated)
0.128
Length
86 amino acids
Sequence
(BLAST)
(BLAST)
1: MIIYFPKRSL KHCCMVIIFS SSHPKNFIML VPGDYISTKS HPVRREKLIV ILDINLQWRM HKVSDGQKRR VQICMGLLHP FKVISF
001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR
Arabidopsis Description
ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.