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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY13124 Canola cytosol 99.29 99.29
AT5G44110.1 Thale cress cytosol 91.87 92.2
CDX86663 Canola cytosol 85.16 82.82
CDY15481 Canola cytosol 84.45 82.41
PGSC0003DMT400026695 Potato cytosol 76.33 75.52
Solyc09g066470.2.1 Tomato cytosol 75.27 74.48
VIT_07s0005g03680.t01 Wine grape plastid 75.27 73.2
KRH19580 Soybean cytosol 74.91 71.62
HORVU6Hr1G088850.1 Barley cytosol 72.08 70.1
TraesCS6B01G415600.1 Wheat cytosol 71.73 69.76
TraesCS6A01G377900.1 Wheat cytosol 71.73 69.76
EES07729 Sorghum cytosol 72.44 69.49
TraesCS6D01G362400.1 Wheat cytosol 69.61 58.28
CDX80812 Canola mitochondrion 29.33 55.33
GSMUA_Achr7P16770_001 Banana cytosol, extracellular, plasma membrane 56.18 54.27
CDX86661 Canola extracellular 15.9 52.33
CDY40345 Canola cytosol 53.71 46.91
CDY10455 Canola cytosol 53.71 46.91
CDX80811 Canola mitochondrion, nucleus, plastid 2.12 19.35
CDX86662 Canola nucleus 13.43 12.03
CDX91492 Canola cytosol 1.77 9.62
Protein Annotations
Gene3D:3.40.50.300MapMan:35.1GO:A0A078HGL5UniProt:A0A078HGL5InterPro:AAA+_ATPaseInterPro:ABC_transporter-like
EnsemblPlants:CDY36977ProteinID:CDY36977ProteinID:CDY36977.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0005524GO:GO:0016787GO:GO:0016887EnsemblPlantsGene:GSBRNA2T00063138001InterPro:IPR003439
InterPro:P-loop_NTPasePFAM:PF00005PFscan:PS50893PANTHER:PTHR12847PANTHER:PTHR12847:SF6SMART:SM00382
SUPFAM:SSF52540UniParc:UPI0000D89699SEG:seg:::
Description
BnaC09g17930DBnaC09g17930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HGL5]
Coordinates
chrLK032388:-:202925..204746
Molecular Weight (calculated)
31563.3 Da
IEP (calculated)
7.639
GRAVY (calculated)
-0.139
Length
283 amino acids
Sequence
(BLAST)
001: MAEKDAMARS DGAIRVSGMQ FSYDVQDPIF FDFSLHLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN IVQVLNRSAF HDTDLVCSGD LSYLGGSWSK
101: TAGSAGEIPL QGDFSAEHMI FGVEGIDPVR REKLIDLLDI NLKWRMHKVS DGQRRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECEQRGA
201: TIVYATHIFD GLETWASHLA YIHGGELKLS AKLKEIKDLE TSPNLLSVVE NWLRSETKVE KKTKKKPVAT SPFMSSRQMA YYR
Best Arabidopsis Sequence Match ( AT5G44110.1 )
(BLAST)
001: MAEKNASAVD GAIRVSGMQF SYDVQDPIFF DFNLDLPAGS RCLLVGANGS GKTTLLKILA GKHMVGGKNV VQVLDRSAFH DTELVCSGDL SYLGGSWSKT
101: AGSAGDIPLQ GDFSAEHMIF GVEGIDPFRR EKLIDLLDIN LQWRMHKVSD GQRRRVQICM GLLHPFKVLL LDEVTVDLDV VARMDLLEFF KEECEQRGAT
201: IVYATHIFDG LETWASHLAY INGGELKLSA KLDEIKDLKT SPNLLSVVEA WLRSETKVEK KTKKKPVVTS PFMSSRQMAY YR
Arabidopsis Description
ABCI21ABC transporter I family member 21 [Source:UniProtKB/Swiss-Prot;Acc:Q9XF19]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.