Factsheet for TraesCS6D01G362400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G415600.1	Wheat	cytosol	81.07	94.16
TraesCS6A01G377900.1	Wheat	cytosol	80.77	93.81
HORVU6Hr1G088850.1	Barley	cytosol	78.11	90.72
EES07729	Sorghum	cytosol	72.19	82.71
PGSC0003DMT400026695	Potato	cytosol	60.95	72.03
Solyc09g066470.2.1	Tomato	cytosol	60.65	71.68
AT5G44110.1	Thale cress	cytosol	59.76	71.63
Bra030549.1-P	Field mustard	cytosol	60.95	70.79
Bra027530.1-P	Field mustard	cytosol	57.99	70.76
AT1G03905.1	Thale cress	cytosol	60.65	70.69
CDY15481	Canola	cytosol	60.65	70.69
KRH19580	Soybean	cytosol	61.54	70.27
VIT_07s0005g03680.t01	Wine grape	plastid	60.35	70.1
CDX86663	Canola	cytosol	60.06	69.76
CDY36977	Canola	cytosol	58.28	69.61
CDY13124	Canola	cytosol	57.99	69.26
GSMUA_Achr7P16770_001	Banana	cytosol, extracellular, plasma membrane	49.11	56.66
TraesCS4D01G180700.1	Wheat	cytosol	42.6	46.3

Protein Annotations

EnsemblPlants:TraesCS6D01G362400.1	EnsemblPlantsGene:TraesCS6D01G362400	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
InterPro:IPR003439	InterPro:P-loop_NTPase	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	PFAM:PF00005	PFscan:PS50893
SMART:SM00382	SUPFAM:SSF52540	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6D:+:452951619..452955174

Molecular Weight (calculated)

38035.6 Da

IEP (calculated)

6.785

GRAVY (calculated)

-0.284

Length

338 amino acids

Sequence
(BLAST)

001: MAGGEEGWRR SGIEVSTLQF GYDGEAPLFA RFNLRVAPGS RCLLVGANGS GKTTLLKILA GKHMVGGKDV VRVLNGSAFH DTQFVCSGDL SYLGGSWSRN
101: VSSVGDVPLQ GDFSAEHMIF GVDGVDPVRR EKLIDLLDID LQWRMHKVSD GQRRRVQICM GLLHPYKVLL LDEITVDLDV VTRMDLLDFF KEECEQREAT
201: IVYATHIFDG LETWATDIAY IQEGELKKSA KYSDIEELKT AKNLLSVVES WLKSETKLPK KEPARVESQP RRPSPFEPPL SGRRATWPTT DDDRVKPLHP
301: FRCHATLESV SSFFLFPIHP CIRQCIYLNL NNKQVERA

Best Arabidopsis Sequence Match ( AT1G03905.1 )
(BLAST)

001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR

Arabidopsis Description

ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.