CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G088850.1	Barley	cytosol	88.14	89.35
TraesCS6A01G377900.1	Wheat	cytosol	87.46	88.66
TraesCS6B01G415600.1	Wheat	cytosol	87.12	88.32
VIT_07s0005g03680.t01	Wine grape	plastid	75.25	76.29
AT1G03905.1	Thale cress	cytosol	73.56	74.83
Solyc09g066470.2.1	Tomato	cytosol	72.54	74.83
PGSC0003DMT400026695	Potato	cytosol	72.54	74.83
KRH19580	Soybean	cytosol	74.92	74.66
Bra030549.1-P	Field mustard	cytosol	72.88	73.88
CDY15481	Canola	cytosol	72.54	73.79
AT5G44110.1	Thale cress	cytosol	70.51	73.76
Bra027530.1-P	Field mustard	cytosol	69.15	73.65
CDX86663	Canola	cytosol	72.54	73.54
CDY36977	Canola	cytosol	69.49	72.44
TraesCS6D01G362400.1	Wheat	cytosol	82.71	72.19
CDY13124	Canola	cytosol	69.15	72.08
GSMUA_Achr7P16770_001	Banana	cytosol, extracellular, plasma membrane	57.97	58.36
EER94951	Sorghum	cytosol	48.47	44.27

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8084685	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	UniProt:C5XV77
EnsemblPlants:EES07729	ProteinID:EES07729	ProteinID:EES07729.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0016787	GO:GO:0016887	InterPro:IPR003439	InterPro:P-loop_NTPase
PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382	EnsemblPlantsGene:SORBI_3004G339300
SUPFAM:SSF52540	unigene:Sbi.6701	UniParc:UPI0001A8604C	RefSeq:XP_002454753.1	:	:

Description

hypothetical protein

Coordinates

chr4:-:67119329..67124158

Molecular Weight (calculated)

33110.6 Da

IEP (calculated)

6.632

GRAVY (calculated)

-0.321

Length

295 amino acids

Sequence
(BLAST)

001: MMAGEGNGDE GWRRSGIEVS ALQFGYDGQP PLFARFNLRV APGSRCLLIG ANGSGKTTLL KILAGKHMVG GRDVVRVLNG SAFHDTQLVC SGDLSYLGGS
101: WSRTIGSAGD VPLQGDFSAE HMIFGVDGVD PVRREKLVDL LDIDLQWRMH KVSDGQRRRV QICMGLLHPY KVLLLDEITV DLDVVTRMDL LDFFKEECEQ
201: REATIVYATH IFDGLETWAT DFAYIQEGEL RRSGRYSDIE ELKSAKNLLS VVESWLRSET KLPKKELPRP ETQARRSSPL DASPFRSSRH MAYYR

Best Arabidopsis Sequence Match ( AT1G03905.1 )
(BLAST)

001: MAEKDATASG DDAIRVSGMQ FAYEVEDPIF FDFNLDLPAG SRCLLVGANG SGKTTLLKIL AGKHMVGGKN VVQVLSRSAF HDTQLVCSGD LSYLGGSWSK
101: TVGSAGEVPL QGDFSAEHMI FGVEGTDPVR REKLIDLLDI NLQWRMHKVS DGQKRRVQIC MGLLHPFKVL LLDEVTVDLD VVARMDLLEF FKEECDQRGA
201: TIVYATHIFD GLETWATHLA YIQDGELNRL SKMTDIEELK TSPNLLSVVE SWLRSEIKLV KKKKKPVAPW KPSPFDNSPF RSSRHMAYYR

Arabidopsis Description

ABCI19ABC transporter I family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q3EDJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.