CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0316900-01	Rice	cytosol	95.36	96.25
TraesCS4D01G180700.1	Wheat	cytosol	89.16	92.6
TraesCS4B01G179200.2	Wheat	cytosol	88.54	91.96
TraesCS4A01G125500.1	Wheat	cytosol	88.54	91.96
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	95.98	88.32
VIT_14s0060g00720.t01	Wine grape	cytosol	79.57	78.12
GSMUA_Achr3P08390_001	Banana	cytosol	80.81	77.91
CDY10455	Canola	cytosol	78.02	77.78
CDY40345	Canola	cytosol	77.71	77.47
Bra009601.1-P	Field mustard	cytosol	77.71	77.23
KRH33782	Soybean	cytosol	78.02	75.68
PGSC0003DMT400007215	Potato	cytosol	76.16	74.77
Solyc01g100850.2.1	Tomato	cytosol	75.54	74.39
AT5G02270.2	Thale cress	cytosol	79.57	72.6
HORVU4Hr1G052430.1	Barley	plastid	89.16	71.64
Bra005714.1-P	Field mustard	cytosol	62.85	67.44
EES07729	Sorghum	cytosol	44.27	48.47

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8066991	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	UniProt:C5X1V1
EnsemblPlants:EER94951	ProteinID:EER94951	ProteinID:EER94951.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0016887
GO:GO:0080167	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847
PANTHER:PTHR12847:SF5	SMART:SM00382	EnsemblPlantsGene:SORBI_3001G391200	SUPFAM:SSF52540	unigene:Sbi.8231	UniParc:UPI0001A82E75
RefSeq:XP_002467953.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:67750627..67754227

Molecular Weight (calculated)

35993.7 Da

IEP (calculated)

8.217

GRAVY (calculated)

-0.193

Length

323 amino acids

Sequence
(BLAST)

001: MAPTVEISHL SFTYPGIDGR PPPGAPPLIE DVCFSLDAGQ RCLLLGSNGA GKTTILKILG GKHMVDPSMV RVLGRSAFHD TALTSSGDLC YLGGEWRRDV
101: AFAGYQVNIQ MDISAEKMIF GVAGVDPKRR DELIKILDID LAWRMHKASD GQRRRVQICM GLLKAFKVLL LDEITVDLDV LARSNLLTYL KKECEERGAT
201: IIYATHIFDG LDDWPTHIVY IAHGKLQLAL PLEKVKEMSQ LSLMRTVESW LRKERDEDRR RRKERKEKGL PEFDMVAEGS RVIGDPAKSA ARVVNNGWAA
301: GRLTSTIAGE ENFVFSSNSV LRQ

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.