Factsheet for Zm00001d047583_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytoskeleton, nucleus, cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytoskeleton 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94951	Sorghum	cytosol	88.32	95.98
Os03t0316900-01	Rice	cytosol	85.47	93.75
TraesCS4D01G180700.1	Wheat	cytosol	81.2	91.64
TraesCS4A01G125500.1	Wheat	cytosol	80.63	91.0
TraesCS4B01G179200.2	Wheat	cytosol	80.63	91.0
GSMUA_Achr3P08390_001	Banana	cytosol	74.36	77.91
VIT_14s0060g00720.t01	Wine grape	cytosol	72.65	77.51
CDY10455	Canola	cytosol	70.37	76.23
CDY40345	Canola	cytosol	70.09	75.93
Bra009601.1-P	Field mustard	cytosol	70.09	75.69
KRH33782	Soybean	cytosol	71.79	75.68
PGSC0003DMT400007215	Potato	cytosol	70.37	75.08
Solyc01g100850.2.1	Tomato	cytosol	69.8	74.7
AT5G02270.2	Thale cress	cytosol	72.36	71.75
HORVU4Hr1G052430.1	Barley	plastid	81.2	70.9
Bra005714.1-P	Field mustard	cytosol	57.27	66.78

Protein Annotations

EntrezGene:100191337	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6PBN7	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
ProteinID:AQL07045.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0016887	GO:GO:0080167	InterPro:IPR003439
InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF5	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI000843D41D	EnsemblPlantsGene:Zm00001d047583	EnsemblPlants:Zm00001d047583_P001	EnsemblPlants:Zm00001d047583_T001	SEG:seg

Description

ABC transporter I family member 20

Coordinates

chr9:+:136358669..136371826

Molecular Weight (calculated)

38898.9 Da

IEP (calculated)

7.926

GRAVY (calculated)

-0.286

Length

351 amino acids

Sequence
(BLAST)

001: MAPTVEISHL TFTYPGIDGR PPPGAPPLIE DVCFSLDAGQ RCLLLGSNGA GKTTILKILG GKHMVDPSMV RVLGRSAFHD TALTSSGDLS YLGGEWRRDV
101: AFAGYQVNIQ MDISAEKMIF GIAGVDPKRR DELIKAGRAS PLHGSTGVRG SEFAGEEPPC DAQILDIDLT WRMHKASDGQ RRRVQICMGL LKSFKVLLLD
201: EITVDLDVLA RSNLLSYLKK ECEERGATII YATHIFDGLD DWPTHIVYIA HGKLQLAVPL EKVKEMSQLS LMRTVESWLR KERNEDRRRR KERKEKGLPE
301: FDKVVEGSRV IGDPAKNADR VINNGWAAGR LTSTIAGEEN FVFSSNSVLR Q

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.