Factsheet for Solyc01g100850.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007215	Potato	cytosol	97.87	97.57
VIT_14s0060g00720.t01	Wine grape	cytosol	85.67	85.41
KRH33782	Soybean	cytosol	80.49	79.28
GSMUA_Achr3P08390_001	Banana	cytosol	79.88	78.21
CDY10455	Canola	cytosol	77.13	78.09
CDY40345	Canola	cytosol	77.13	78.09
Bra009601.1-P	Field mustard	cytosol	77.13	77.85
Os03t0316900-01	Rice	cytosol	75.0	76.88
TraesCS4D01G180700.1	Wheat	cytosol	72.87	76.85
TraesCS4A01G125500.1	Wheat	cytosol	72.87	76.85
TraesCS4B01G179200.2	Wheat	cytosol	72.26	76.21
EER94951	Sorghum	cytosol	74.39	75.54
AT5G02270.2	Thale cress	cytosol	79.88	74.01
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	74.7	69.8
Bra005714.1-P	Field mustard	cytosol	61.59	67.11
HORVU4Hr1G052430.1	Barley	plastid	73.48	59.95
Solyc09g066470.2.1	Tomato	cytosol	44.21	50.7

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0009628	GO:GO:0016787
GO:GO:0016887	GO:GO:0080167	InterPro:IPR003439	UniProt:K4B1B6	InterPro:P-loop_NTPase	PFAM:PF00005
PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF6	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:Solyc01g100850.2
EnsemblPlants:Solyc01g100850.2.1	UniParc:UPI00027678B3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1:+:90759929..90763385

Molecular Weight (calculated)

36769.6 Da

IEP (calculated)

9.332

GRAVY (calculated)

-0.345

Length

328 amino acids

Sequence
(BLAST)

001: MAVKDKKPSV EINNLKFTYP GIDGHPPPGS TPLIDDFNLT LYPGDRCLLV GSNGAGKTTI LKILGGKHMV EPDMVRVLGR SAFHDTALTA SGDLSYLGGE
101: WRREVAFAGF EVPIQMDVSA EKMIFGVPGT DPQRRDELIK VLGIDLSWRM HRSSDGQRRR VQICMGLLKP FKVLLLDEIT VDLDVLARAD LLKFLIKECE
201: ERGATIIYAT HIFDGLENWP SHLIYVAHGK LQLAMPMDRV KQISNLSLMR TVERWLRKER DEERQRRKER KAKGLPEYEK QVEGTRVVGG DPGRAAGRPL
301: NNGWAGGTLH STIAGEENFF LSSNRVLR

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.