Factsheet for Os03t0316900-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94951	Sorghum	cytosol	96.25	95.36
TraesCS4D01G180700.1	Wheat	cytosol	89.69	92.28
TraesCS4A01G125500.1	Wheat	cytosol	89.06	91.64
TraesCS4B01G179200.2	Wheat	cytosol	89.06	91.64
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	93.75	85.47
VIT_14s0060g00720.t01	Wine grape	cytosol	80.62	78.42
GSMUA_Achr3P08390_001	Banana	cytosol	81.88	78.21
CDY10455	Canola	cytosol	77.81	76.85
CDY40345	Canola	cytosol	77.5	76.54
Bra009601.1-P	Field mustard	cytosol	77.5	76.31
KRH33782	Soybean	cytosol	79.38	76.28
Solyc01g100850.2.1	Tomato	cytosol	76.88	75.0
PGSC0003DMT400007215	Potato	cytosol	76.88	74.77
AT5G02270.2	Thale cress	cytosol	80.94	73.16
HORVU4Hr1G052430.1	Barley	plastid	89.69	71.39
Bra005714.1-P	Field mustard	cytosol	63.75	67.77

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:4332655	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	ProteinID:ABF95624.1
EMBL:AK069044	ProteinID:BAF11854.1	ProteinID:BAS83907.1	ProteinID:EEE58948.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0009628	GO:GO:0016787
GO:GO:0016887	GO:GO:0080167	InterPro:IPR003439	EnsemblPlantsGene:Os03g0316900	EnsemblPlants:Os03t0316900-01	InterPro:P-loop_NTPase
PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847	PANTHER:PTHR12847:SF5	UniProt:Q10MA7	SMART:SM00382
SUPFAM:SSF52540	UniParc:UPI0000DB45F1	RefSeq:XP_015628219.1	SEG:seg	:	:

Description

ABC TRANSPORTER I FAMILY MEMBER 15Similar to NBD-like protein. (Os03t0316900-01)

Coordinates

chr3:+:11395982..11398885

Molecular Weight (calculated)

35742.4 Da

IEP (calculated)

8.218

GRAVY (calculated)

-0.209

Length

320 amino acids

Sequence
(BLAST)

001: MAPTVEISHL SFTYPGIDGR PPPGAPPLIE DVCFSLDAGH RCLLLGSNGA GKTTILKILG GKHMVDPSMV RVLGRSAFHD TALTSSGDLC YLGGEWRRDV
101: AFAGYQVNIQ MDISAEKMIF GVVGVDPQRR DELIKILDID LAWRMHKASD GQRRRVQICM GLLKPFKVLL LDEITVDLDV LARANLLTYL KKECEERGAT
201: IIYATHIFDG LDDWPTHIVY IARGKLQLAL PLEKVKEMSQ LSLMRTVESW LRKERDEDRR RRKERKEKGL PEFDKVTEGS RVIGDPAARA VNNGWAAGRL
301: ASTVAGEENF IFSSNSVLRQ

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.