Factsheet for TraesCS4A01G125500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G180700.1	Wheat	cytosol	99.36	99.36
TraesCS4B01G179200.2	Wheat	cytosol	98.71	98.71
Os03t0316900-01	Rice	cytosol	91.64	89.06
EER94951	Sorghum	cytosol	91.96	88.54
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	91.0	80.63
HORVU4Hr1G052430.1	Barley	plastid	99.36	76.87
GSMUA_Achr3P08390_001	Banana	cytosol	81.03	75.22
VIT_14s0060g00720.t01	Wine grape	cytosol	79.42	75.08
CDY10455	Canola	cytosol	78.14	75.0
CDY40345	Canola	cytosol	78.14	75.0
Bra009601.1-P	Field mustard	cytosol	78.14	74.77
KRH33782	Soybean	cytosol	78.78	73.57
Solyc01g100850.2.1	Tomato	cytosol	76.85	72.87
PGSC0003DMT400007215	Potato	cytosol	76.85	72.64
AT5G02270.2	Thale cress	cytosol	79.1	69.49
Bra005714.1-P	Field mustard	cytosol	62.06	64.12
TraesCS6A01G377900.1	Wheat	cytosol	44.37	47.42

Protein Annotations

Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0008150	GO:GO:0009628	GO:GO:0016787
GO:GO:0016887	GO:GO:0080167	InterPro:IPR003439	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893
PANTHER:PTHR12847	PANTHER:PTHR12847:SF5	SMART:SM00382	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS4A01G125500	EnsemblPlants:TraesCS4A01G125500.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:161427959..161430776

Molecular Weight (calculated)

34777.3 Da

IEP (calculated)

8.706

GRAVY (calculated)

-0.207

Length

311 amino acids

Sequence
(BLAST)

001: MAPTVEIRNL TFTYPGIDGK PPPGAPPLIE DVCFSLEAAQ RCLLVGSNGA GKTTILKILG GKHMVDPSMV RVLGRSAFHD TALTSSGDLC YLGGEWRRDV
101: AFAGYQVNIQ MDISAEKMLF GVTGVDPQRR DELIKILDVD LTWRMHKASD GQRRRVQICM GLLKPFKVLL LDEITVDLDV LARANLLTYL KKECAEQGAT
201: IIYATHIFDG LDDWPTHIVY VAHGKLQLAL PLEKVKEMSQ LSLMRTVERW LRKERDEDRR KRKERKEKGL PAFDKVIEGS RVVNNGWAAG RLTSTIAGEE
301: NFSLSSNSVL R

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.