Factsheet for VIT_14s0060g00720.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400007215	Potato	cytosol	86.93	86.93
Solyc01g100850.2.1	Tomato	cytosol	85.41	85.67
Bra009601.1-P	Field mustard	cytosol	83.59	84.62
CDY40345	Canola	cytosol	82.98	84.26
KRH33782	Soybean	cytosol	84.8	83.78
CDY10455	Canola	cytosol	82.07	83.33
Os03t0316900-01	Rice	cytosol	78.42	80.62
GSMUA_Achr3P08390_001	Banana	cytosol	82.07	80.6
EER94951	Sorghum	cytosol	78.12	79.57
TraesCS4D01G180700.1	Wheat	cytosol	75.08	79.42
TraesCS4A01G125500.1	Wheat	cytosol	75.08	79.42
AT5G02270.2	Thale cress	cytosol	85.41	79.38
TraesCS4B01G179200.2	Wheat	cytosol	74.47	78.78
Bra005714.1-P	Field mustard	cytosol	67.17	73.42
Zm00001d047583_P001	Maize	cytoskeleton, cytosol, nucleus	77.51	72.65
HORVU4Hr1G052430.1	Barley	plastid	75.68	61.94
VIT_07s0005g03680.t01	Wine grape	plastid	45.29	51.2

Protein Annotations

EntrezGene:100259555	wikigene:100259555	Gene3D:3.40.50.300	MapMan:35.1	InterPro:AAA+_ATPase	InterPro:ABC_transporter-like
EMBL:AM480926	ProteinID:CAN66319	ProteinID:CAN66319.1	ProteinID:CBI39636	ProteinID:CBI39636.3	UniProt:D7UA72
EMBL:FN596746	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524
GO:GO:0008150	GO:GO:0009628	GO:GO:0016787	GO:GO:0016887	GO:GO:0080167	InterPro:IPR003439
EntrezGene:LOC100259555	wikigene:LOC100259555	InterPro:P-loop_NTPase	PFAM:PF00005	PFscan:PS50893	PANTHER:PTHR12847
PANTHER:PTHR12847:SF6	SMART:SM00382	SUPFAM:SSF52540	TIGR:TC61987	UniParc:UPI00015C9DEB	ArrayExpress:VIT_14s0060g00720
EnsemblPlantsGene:VIT_14s0060g00720	EnsemblPlants:VIT_14s0060g00720.t01	RefSeq:XP_002281168	RefSeq:XP_002281168.1	RefSeq:XP_003633613	RefSeq:XP_003633613.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:-:613496..616485

Molecular Weight (calculated)

36757.6 Da

IEP (calculated)

9.195

GRAVY (calculated)

-0.223

Length

329 amino acids

Sequence
(BLAST)

001: MAVKDISKQT VEINNLRFTY PGIDGQPPPG STPLIDHFSL TLNSGDRCLL VGSNGAGKTT ILKILGGKHM VEPHMVRVLG RSAFHDTALT SSGDLCYLGG
101: EWRRDVAFAG FEVPIQMDVS AEKMIFGVSG IDPQRRAELI KVLDIDLSWR LHKVSDGQRR RVQICMGLLK PFKVLLLDEI TVDLDVLARA DLLKFLRKEC
201: EERGATIIYA THIFDGLENW PSHLVYVAHG KLQLAMPMEK VREMSNLSLM RTVESWLRKE RDEGRKRRKE RKAVGLPEFE SQVEGSRVAG DPARAAVRAL
301: NNGWAAGRLH STIAGEENFF LSSNSVLRQ

Best Arabidopsis Sequence Match ( AT5G02270.1 )
(BLAST)

001: MAVTEEEKKR NSTVEISGLR FTYPGIDGHP PPGSKPLIED FSITLNSSDR CLLVGSNGAG KTTILKILGG KHMVEPHMVR VLGRSAFHDT GLTSSGDLCY
101: LGGEWRRDVA FAGFEVPIQM DISAEKMIFG VAGIDPQRRD ELIKVLDIDI SWRLHKVSDG QRRRVQICMG LLKPFKVLLL DEITVDLDVL ARADLLKFLR
201: KECEERGATI IYATHIFDGL EDWPTHIVYV ANGKLQLALP MEKVKETSKK SLMRTVESWL RKERDEERKR RKERKANGLP EFETRTEESR VTGDPARMLN
301: NGWAAGRLHS TVAGGEDNFV LSSNRVLR

Arabidopsis Description

ATNAP9Non-intrinsic ABC protein 9 [Source:UniProtKB/TrEMBL;Acc:F4KCB8]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.