CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	golgi
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra013539.1-P	Field mustard	cytosol	86.32	84.62
CDX79075	Canola	cytosol, nucleus, plastid	82.96	82.04
CDY58005	Canola	cytosol, mitochondrion, nucleus	57.62	61.48
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	20.85	58.49
AT5G62390.1	Thale cress	cytosol	53.59	53.59
VIT_19s0140g00180.t01	Wine grape	mitochondrion	10.54	47.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	10.54	47.0
VIT_16s0022g00640.t01	Wine grape	cytosol	41.26	46.58
KRH39973	Soybean	nucleus	39.46	43.78
KRH23808	Soybean	cytosol	39.01	43.72
Solyc03g083970.2.1	Tomato	nucleus	37.89	42.78
GSMUA_Achr2P17880_001	Banana	nucleus	25.78	42.28
PGSC0003DMT400035992	Potato	cytosol	37.67	41.69
TraesCS5A01G047200.1	Wheat	nucleus	14.35	35.56
TraesCS7D01G010300.1	Wheat	golgi, nucleus	28.7	31.53
GSMUA_AchrUn_...	Banana	cytosol	30.49	31.41
TraesCS7A01G010500.1	Wheat	nucleus	28.48	30.6
Zm00001d045596_P001	Maize	plasma membrane	28.25	30.58
EER89037	Sorghum	golgi, nucleus, plastid	28.03	30.34
EES04331	Sorghum	cytosol	26.91	28.71
Zm00001d014946_P001	Maize	plasma membrane	25.78	28.33
Os06t0104400-01	Rice	plasma membrane	26.68	28.2
Os02t0105500-01	Rice	cytosol	22.87	25.63

Protein Annotations

EnsemblPlants:CDX82838	EnsemblPlantsGene:GSBRNA2T00138186001	Gene3D:1.20.5.1190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR33322	PANTHER:PTHR33322:SF3	PFscan:PS50096
ProteinID:CDX82838	ProteinID:CDX82838.1	SEG:seg	UniParc:UPI0004EE427A	MapMan:35.1	:

Description

BnaC01g12880D

Coordinates

chrLK031830:-:636393..638368

Molecular Weight (calculated)

51625.7 Da

IEP (calculated)

9.189

GRAVY (calculated)

-0.850

Length

446 amino acids

Sequence
(BLAST)

001: MSWIRRLDLI DPYYTCSPPL VIHRETSIVK PPSSFFDHVF EEEDVAAFPF GFSSPSPLDL FFETDLVLIE KSIRRRREEE YPLQYLCDRV SQLETKFERC
101: LVGGGGRDGS DRKYKLTKEI KAGSGERKYK WEAEIQGPPG RKYKWEAEPT ERKYKWEAEK YTWTTEIKGG KKKDVVALKK AKAAAEAAEA EEMEAKKKKK
201: SYNWTTELKS ERENGEMQHT YTIKASSSGG DKGKKHEEKE KLKKIKKKEK PRVVVIEEDD EEDEEEDDSE EHGAILLRKA YSRRSGAVRS KKGKNKEMPP
301: EYAAVMIQRA FRAYLIRRSK ALRALRDLAI AKTKLKELRA SFHNFNYRRV ISRDAEERQK FSEKIIVLLL TVDAIEGVDV MVRGAKRSMV DELEAMLEVV
401: DPQPQQGKSL SMRRRTFDMP DTMIRNEIAE GVTQIVQLLE TEEGCT

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.