Factsheet for TraesCS7D01G010300.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, nucleus

Predictor Summary:

nucleus 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	38.67	98.74
TraesCS7A01G010500.1	Wheat	nucleus	85.47	83.61
TraesCS5A01G047200.1	Wheat	nucleus	30.54	68.89
EER89037	Sorghum	golgi, nucleus, plastid	66.01	65.05
Zm00001d045596_P001	Maize	plasma membrane	65.02	64.08
Os06t0104400-01	Rice	plasma membrane	64.53	62.09
GSMUA_Achr2P17880_001	Banana	nucleus	36.95	55.15
VIT_19s0140g00180.t01	Wine grape	mitochondrion	12.07	49.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	11.82	48.0
VIT_15s0048g00590.t01	Wine grape	endoplasmic reticulum	11.08	46.88
GSMUA_AchrUn_...	Banana	cytosol	38.42	36.03
Solyc03g083970.2.1	Tomato	nucleus	32.27	33.16
PGSC0003DMT400035992	Potato	cytosol	32.27	32.51
VIT_16s0022g00640.t01	Wine grape	cytosol	31.53	32.41
KRH23808	Soybean	cytosol	30.79	31.41
KRH39973	Soybean	nucleus	31.03	31.34
CDY58005	Canola	cytosol, mitochondrion, nucleus	31.03	30.14
CDX79075	Canola	cytosol, nucleus, plastid	32.51	29.27
CDX82838	Canola	cytosol	31.53	28.7
AT5G62390.1	Thale cress	cytosol	31.03	28.25
Bra013539.1-P	Field mustard	cytosol	31.03	27.69

Protein Annotations

EnsemblPlants:TraesCS7D01G010300.1	EnsemblPlantsGene:TraesCS7D01G010300	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0005886	GO:GO:0006457	GO:GO:0006950	GO:GO:0008150	GO:GO:0009506
GO:GO:0009628	GO:GO:0009987	GO:GO:0016020	GO:GO:0034605	GO:GO:0034620	GO:GO:0070417
ncoils:Coil	PANTHER:PTHR33322	PANTHER:PTHR33322:SF2	SEG:seg	MapMan:35.1	:

Description

No Description!

Coordinates

chr7D:-:4895062..4897817

Molecular Weight (calculated)

43254.6 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.747

Length

406 amino acids

Sequence
(BLAST)

001: MGSSHRHLMR LLDDPFFPFP XXXXXXXXXX XXXXXXXXXX XXXXFPHHPD LLDLYLPADP FFAPPPIPSP HAFLLHDLTD RVAALELAAR AARAAAPQPA
101: RRKYTYAATE PGGRKVKWTA EDKPRGGGRA LKWEAELASP NDDGFDRKWR WEAKSKPGGK AKTKWGTEIK GKGSLQPWSH AYTWEEDFTA SDDDDELEVE
201: ERRPEKPKKI KEDDKKTKKK PARTCVQIEE IPEDNTAGCD AIRKAFAMGN GKGKAKELSP QDAALLIQMN YRAHLAHRSQ VLRCLRDLAV AKAKLKELRS
301: LFYNLSYRRR LSHDHEERQR FSEKIIVLLL TVDALEGPDF MVRTAKKSML EELESMLEIV DPQPPGKQRS FNRRKFDLPE GGAIPNEKTA GVNNAVRVIN
401: TGKGKQ

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.