Factsheet for GSMUA_Achr2P17880_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 1
mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	37.87	64.78
VIT_15s0048g00590.t01	Wine grape	endoplasmic reticulum	20.96	59.38
GSMUA_AchrUn_...	Banana	cytosol	77.57	48.73
TraesCS5A01G047200.1	Wheat	nucleus	31.62	47.78
VIT_19s0140g00180.t01	Wine grape	mitochondrion	16.54	45.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	16.54	45.0
TraesCS7D01G010300.1	Wheat	golgi, nucleus	55.15	36.95
EER89037	Sorghum	golgi, nucleus, plastid	55.51	36.65
TraesCS7A01G010500.1	Wheat	nucleus	55.88	36.63
Zm00001d045596_P001	Maize	plasma membrane	54.78	36.16
EES04331	Sorghum	cytosol	53.31	34.69
Zm00001d014946_P001	Maize	plasma membrane	51.47	34.48
Os06t0104400-01	Rice	plasma membrane	53.31	34.36
VIT_16s0022g00640.t01	Wine grape	cytosol	49.63	34.18
KRH39973	Soybean	nucleus	49.63	33.58
KRH23808	Soybean	cytosol	48.9	33.42
Solyc03g083970.2.1	Tomato	nucleus	47.43	32.66
Os02t0105500-01	Rice	cytosol	47.43	32.41
PGSC0003DMT400035992	Potato	cytosol	47.06	31.76
CDY58005	Canola	cytosol, mitochondrion, nucleus	44.12	28.71
Bra013539.1-P	Field mustard	cytosol	43.75	26.15
CDX82838	Canola	cytosol	42.28	25.78
CDX79075	Canola	cytosol, nucleus, plastid	42.65	25.72
AT5G62390.1	Thale cress	cytosol	41.54	25.34

Protein Annotations

EnsemblPlants:GSMUA_Achr2P17880_001	EnsemblPlants:GSMUA_Achr2T17880_001	EnsemblPlantsGene:GSMUA_Achr2G17880_001	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	InterPro:BAG_dom_sf	InterPro:BAG_domain	InterPro:IPR000048	InterPro:IPR003103	InterPro:IPR036533
InterPro:IQ_motif_EF-hand-BS	ncoils:Coil	PANTHER:PTHR33322	PANTHER:PTHR33322:SF3	PFAM:PF02179	PFscan:PS50096
SEG:seg	SUPFAM:SSF63491	UniParc:UPI000295E7AD	UniProt:M0S8X9	MapMan:35.1	:

Description

IQ calmodulin-binding motif family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G17880_001]

Coordinates

chr2:-:18359188..18363228

Molecular Weight (calculated)

30699.1 Da

IEP (calculated)

10.183

GRAVY (calculated)

-0.649

Length

272 amino acids

Sequence
(BLAST)

001: MAAAKAGGER ALKCTAEFKG AEEDEGFDRK FVWAANGKGV GERNVKWTAE FKGKGKDSPL SRAYTWASST KPREDDEEEK AAKKEKKKEK KAKEGTVHVV
101: EIEEKNPGAI AIRKAFTKRC NKGKKKELTP QDAALLIQVT FRSHLARRSQ ILRCLRELAV AKARLKEIRA FFYNFSYRRR ISKDAEECQR FSEKIIVLLL
201: TVDAIEGPDY MVRAAKKSMV EELDAMLEVV DPQPSGKLGS MRRRKFNLPD AGQISKEMMV GVAEVVQLLD QE

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.