CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79075	Canola	cytosol, nucleus, plastid	64.35	59.65
AT5G62390.1	Thale cress	cytosol	63.4	59.42
CDX82838	Canola	cytosol	61.48	57.62
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	21.77	57.23
VIT_16s0022g00640.t01	Wine grape	cytosol	44.5	47.09
VIT_19s0140g00180.t01	Wine grape	mitochondrion	11.24	47.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	11.24	47.0
KRH39973	Soybean	nucleus	44.02	45.77
KRH23808	Soybean	cytosol	43.06	45.23
PGSC0003DMT400035992	Potato	cytosol	42.58	44.17
GSMUA_Achr2P17880_001	Banana	nucleus	28.71	44.12
Solyc03g083970.2.1	Tomato	nucleus	41.15	43.54
TraesCS5A01G047200.1	Wheat	nucleus	15.79	36.67
TraesCS7D01G010300.1	Wheat	golgi, nucleus	30.14	31.03
Zm00001d045596_P001	Maize	plasma membrane	30.14	30.58
GSMUA_AchrUn_...	Banana	cytosol	31.58	30.48
EER89037	Sorghum	golgi, nucleus, plastid	29.9	30.34
TraesCS7A01G010500.1	Wheat	nucleus	29.67	29.88
Os06t0104400-01	Rice	plasma membrane	28.47	28.2
EES04331	Sorghum	cytosol	27.27	27.27
Zm00001d014946_P001	Maize	plasma membrane	26.08	26.85
Os02t0105500-01	Rice	cytosol	24.4	25.63

Protein Annotations

EnsemblPlants:CDY58005	EnsemblPlantsGene:GSBRNA2T00022936001	Gene3D:1.20.5.1190	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0051087	InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	PANTHER:PTHR33322	PANTHER:PTHR33322:SF3	PFscan:PS50096
ProteinID:CDY58005	ProteinID:CDY58005.1	SEG:seg	UniParc:UPI0004EE0321	UniProt:A0A078J2Y9	MapMan:35.1

Description

BnaC03g74970DBnaC03g74970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J2Y9]

Coordinates

chrLK033624:+:34587..36462

Molecular Weight (calculated)

48367.3 Da

IEP (calculated)

9.750

GRAVY (calculated)

-0.785

Length

418 amino acids

Sequence
(BLAST)

001: MSWIRRLDLI DPYYTCSPLI VRETSIVEPS PFFPSFIHDD EDLAFPLGFP SPSPLDLFES VTDLVKIEKS PSSCKYQLVR RRAEPEYPLQ YLCDRVSELE
101: IKFERLVGPK GRDSDRKYKL TKEIKGSGER KYKWEAEIQG PPGRKYKWEA EFEGPGERKY TWTTEIKGGK EDGVAPKKAK AKAKAEAEAE KKMKKKKSYN
201: WTTELKSERE NGEMQHTYTI KASSGGEKKK KEKPRVVEIE EDEEEHGAIL LRKAYSRRSG AVRTKKGKNK EMPPEYAAVM IQRAFRAYLI RRSKALRALR
301: DLAIAKTKLK ELRASFHNFN FRRVISRDAE ERQKFSEKII VLLLTVDAIE GVDVMVRGAK RSMVDELEAM LEVVDPQPQQ GKSLSMLRRT FDMPDRMIRN
401: EIAEGVTQIV QMLETEEE

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.