Factsheet for VIT_16s0022g00640.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0140g00180.t01	Wine grape	mitochondrion	16.71	66.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	16.71	66.0
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	23.29	57.86
VIT_15s0048g00590.t01	Wine grape	endoplasmic reticulum	13.42	55.21
Solyc03g083970.2.1	Tomato	nucleus	53.42	53.42
KRH39973	Soybean	nucleus	53.42	52.49
PGSC0003DMT400035992	Potato	cytosol	53.42	52.36
KRH23808	Soybean	cytosol	52.66	52.26
GSMUA_Achr2P17880_001	Banana	nucleus	34.18	49.63
CDY58005	Canola	cytosol, mitochondrion, nucleus	47.09	44.5
AT5G62390.1	Thale cress	cytosol	48.61	43.05
CDX82838	Canola	cytosol	46.58	41.26
TraesCS5A01G047200.1	Wheat	nucleus	17.97	39.44
Bra013539.1-P	Field mustard	cytosol	45.32	39.34
CDX79075	Canola	cytosol, nucleus, plastid	44.81	39.25
GSMUA_AchrUn_...	Banana	cytosol	41.27	37.64
Zm00001d045596_P001	Maize	plasma membrane	34.43	33.01
EER89037	Sorghum	golgi, nucleus, plastid	34.43	33.01
TraesCS7D01G010300.1	Wheat	golgi, nucleus	32.41	31.53
EES04331	Sorghum	cytosol	33.16	31.34
Os06t0104400-01	Rice	plasma membrane	33.16	31.04
TraesCS7A01G010500.1	Wheat	nucleus	32.41	30.84
Zm00001d014946_P001	Maize	plasma membrane	31.14	30.3
Os02t0105500-01	Rice	cytosol	27.59	27.39

Protein Annotations

EntrezGene:100246705	wikigene:100246705	MapMan:35.1	EMBL:AM443499	ProteinID:CAN71917	ProteinID:CAN71917.1
ProteinID:CCB49326	ProteinID:CCB49326.1	UniProt:F6HAU1	EMBL:FN595506	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009266	GO:GO:0009506
GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0043207	GO:GO:0051087
InterPro:IPR000048	InterPro:IQ_motif_EF-hand-BS	EntrezGene:LOC100246705	wikigene:LOC100246705	PFscan:PS50096	PANTHER:PTHR33322
PANTHER:PTHR33322:SF3	TIGR:TC63663	UniParc:UPI0001985E3F	ArrayExpress:VIT_16s0022g00640	EnsemblPlantsGene:VIT_16s0022g00640	EnsemblPlants:VIT_16s0022g00640.t01
unigene:Vvi.1683	RefSeq:XP_002265974	RefSeq:XP_002265974.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr16:+:11982574..11990706

Molecular Weight (calculated)

45267.8 Da

IEP (calculated)

9.863

GRAVY (calculated)

-0.492

Length

395 amino acids

Sequence
(BLAST)

001: MSRFSRIEFF EPYPSISRWE TSIFAPKPLF FAEDDDDLFY GLDLFKPGPD PYELFDTVTD LIQIKKTTPF CSSYKRIHRR VGSELYLQSL TDRVSALELS
101: FDRLLKARTC GGDRKYTWTA EINSPAKNGF DRKYKWMAEI KEGKAKKKRE EKVVEKNYKW TAEIKGKGDE APILRTYTWK VSSGAAGECS GVVKEKKKEK
201: CKKELGRTRV VEIEEAADNG AVVLRQAFAK RVGAVKSKGK KKELSPQDAA IMIQMSFRAY LIRRSQALRA LRELAVAKAK LKEIRVLFNN YRRRVTDDAE
301: ERQRISEKII VLLIHVDDIE GADLMVRAAK RSIVDELEAM LEVVDPLPPG RTLSMRRRMF DMPSRVIQKE LAEGVAQVVQ MLDQEENGAA FEACL

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.