Factsheet for Os06t0104400-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2
plastid 2

Predictors

GFP

MS/MS

Papers

plasma membrane: 18260611
plasma membrane: 19502382
plastid: 21433289
nucleus: 26035336
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 19502382 doi

M Fujiwara, S Hamada, M Hiratsuka, Y Fukao, T Kawasaki, K Shimamoto

Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.

msms PMID: 26035336 doi

M Li, X Yin, K Sakata, P Yang, S Komatsu

§Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan., †Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China., ‡National Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 21433289 doi

S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky

Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	31.75	84.28
EER89037	Sorghum	golgi, nucleus, plastid	64.93	66.5
Zm00001d045596_P001	Maize	plasma membrane	63.74	65.29
TraesCS7D01G010300.1	Wheat	golgi, nucleus	62.09	64.53
TraesCS7A01G010500.1	Wheat	nucleus	60.66	61.69
TraesCS5A01G047200.1	Wheat	nucleus	25.36	59.44
GSMUA_Achr2P17880_001	Banana	nucleus	34.36	53.31
Os02t0105500-01	Rice	cytosol	49.29	52.26
VIT_19s0140g00180.t01	Wine grape	mitochondrion	11.61	49.0
VIT_19s0140g00160.t01	Wine grape	mitochondrion	11.37	48.0
VIT_15s0048g00590.t01	Wine grape	endoplasmic reticulum	10.66	46.88
GSMUA_AchrUn_...	Banana	cytosol	37.2	36.26
VIT_16s0022g00640.t01	Wine grape	cytosol	31.04	33.16
Solyc03g083970.2.1	Tomato	nucleus	30.33	32.41
PGSC0003DMT400035992	Potato	cytosol	30.57	32.01
KRH23808	Soybean	cytosol	29.86	31.66
KRH39973	Soybean	nucleus	30.09	31.59
CDY58005	Canola	cytosol, mitochondrion, nucleus	28.2	28.47
AT5G62390.1	Thale cress	cytosol	29.38	27.8
CDX79075	Canola	cytosol, nucleus, plastid	28.91	27.05
CDX82838	Canola	cytosol	28.2	26.68
Bra013539.1-P	Field mustard	cytosol	27.96	25.93

Protein Annotations

EnsemblPlants:Os06t0104400-01	EnsemblPlantsGene:Os06g0104400	GO:GO:0005575	GO:GO:0006457	GO:GO:0008150	GO:GO:0009266
GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009987	GO:GO:0043207
PANTHER:PTHR33322	PANTHER:PTHR33322:SF2	PFscan:PS51257	ProteinID:BAD67696.1	ProteinID:BAS95733.1	SEG:seg
UniParc:UPI0000457C4E	UniProt:Q5VS79	MapMan:35.1	:	:	:

Description

Similar to IQ calmodulin-binding motif family protein. (Os06t0104400-01);IQ calmodulin-binding region domain containing protein. (Os06t0104400-02)

Coordinates

chr6:-:306006..308707

Molecular Weight (calculated)

47819.0 Da

IEP (calculated)

9.108

GRAVY (calculated)

-0.706

Length

422 amino acids

Sequence
(BLAST)

001: MSSHHRYAHL LDDPFFPFPP PSSSSCPFLS PPAASSTCPF FALDSPFAAD PFHLHPFLPT PPTSSLLDPF LLHTLTDRVS QLELALAARA PHPRPTSRKC
101: TYVTESTGRK VKWTTEDKPR AGERVLKWEA ELDSPYDDGF DRKWKWEAKA KTASAAATKL KWATHLKGKG CLEPWSHSYT WEEDFSATDD DDDEEIEDQL
201: HHKALQDHSK LKTKAKDDKK KKKKDNNTVV VNKEQKKCPF SVKIEEIPPE EDNTAGCVAI RKAFALGNGK AKKKELSPQD AALLIQLNYR AHLAHRSQVL
301: RCLRDLAVAK AKLKEIRSLF YNISYRHRMA HDHEERQRFT EKIIVLLLTV DALEGPDYMV RTAKKSMLDE LEGMLEIVDP QPPGKQRSLT RRKFDLPEGG
401: PITDEKMAGV NNAVKVIQKG KK

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.