Factsheet for VIT_19s0140g00160.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 7
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_19s0140g00180.t01	Wine grape	mitochondrion	98.0	98.0
HORVU7Hr1G001010.2	Barley	cytosol, plasma membrane	48.0	30.19
TraesCS5A01G047200.1	Wheat	nucleus	41.0	22.78
VIT_16s0022g00640.t01	Wine grape	cytosol	66.0	16.71
GSMUA_Achr2P17880_001	Banana	nucleus	45.0	16.54
Solyc03g083970.2.1	Tomato	nucleus	52.0	13.16
PGSC0003DMT400035992	Potato	cytosol	52.0	12.9
KRH23808	Soybean	cytosol	51.0	12.81
KRH39973	Soybean	nucleus	51.0	12.69
Zm00001d045596_P001	Maize	plasma membrane	50.0	12.14
EER89037	Sorghum	golgi, nucleus, plastid	50.0	12.14
TraesCS7D01G010300.1	Wheat	golgi, nucleus	48.0	11.82
EES04331	Sorghum	cytosol	49.0	11.72
Zm00001d014946_P001	Maize	plasma membrane	47.0	11.58
TraesCS7A01G010500.1	Wheat	nucleus	48.0	11.57
VIT_15s0048g00590.t01	Wine grape	endoplasmic reticulum	11.0	11.46
Os06t0104400-01	Rice	plasma membrane	48.0	11.37
CDY58005	Canola	cytosol, mitochondrion, nucleus	47.0	11.24
Os02t0105500-01	Rice	cytosol	44.0	11.06
GSMUA_AchrUn_...	Banana	cytosol	46.0	10.62
CDX82838	Canola	cytosol	47.0	10.54
CDX79075	Canola	cytosol, nucleus, plastid	47.0	10.42
Bra013539.1-P	Field mustard	cytosol	47.0	10.33
AT5G62390.1	Thale cress	cytosol	44.0	9.87

Protein Annotations

ArrayExpress:VIT_19s0140g00160	EMBL:FN596014	EnsemblPlants:VIT_19s0140g00160.t01	EnsemblPlantsGene:VIT_19s0140g00160	GO:GO:0005575	GO:GO:0006457
GO:GO:0008150	GO:GO:0009266	GO:GO:0009506	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628
GO:GO:0009987	GO:GO:0043207	PANTHER:PTHR33322	PANTHER:PTHR33322:SF3	ProteinID:CCB57265	ProteinID:CCB57265.1
UniParc:UPI0002108E72	UniProt:F6HRF7	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr19:+:15646432..15646734

Molecular Weight (calculated)

11809.4 Da

IEP (calculated)

9.757

GRAVY (calculated)

-0.495

Length

100 amino acids

Sequence
(BLAST)

1: MVHMSLRAYL IRRSQALHAL RDLAVAKAKL KEIRVLFNNC RHRVTDDAEE RQRIFEKIMV LLIHVDDIKG ADPWCKNYNL HPKETRLQAT NEVDWSCGRQ

Best Arabidopsis Sequence Match ( AT5G62390.1 )
(BLAST)

001: MTLFHRLDLI DPYTCTPLIV RETSIVEPSS LFLGFPSFID EDIEDLFEFS SPNPLDLFET VTDLVKIKKS PSSCKYKVIR RRLEPEYPLK YLCDRVSDLE
101: SKFDRLVSPK SDRKYTLTKE IKGSGERKYK WEAEIQGPLE RKYKLEAEIE GSGERKYRWT TEIKGGKKDE EGLKLAALKK EKAKAKAIAA AEAEKKKNKN
201: KKKSYNWTTE VKSERENGEV SHTYIIKATT GGEKKKKHEE KEKKEKIETK SKKKEKTRVV VIEEEEEEDD ESSEHGAIVL RKAFSRRNGA VRTKKGKNKE
301: MPPEYAAVMI QRAFKAYLIR RSKSLRALRD LAIAKTKLKE LRASFHNFSY RRLIARDGEE RQKFSEKIIV LLLTVDAIEG VDVMVRGAKR SMVDELEAML
401: DVVDPQPQGK SLSMRRRTFD MPDSLIRKEI AEGVTQIVQM LETEEE

Arabidopsis Description

BAG7BAG family molecular chaperone regulator 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVA0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.