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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 8
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86372 Canola plastid 91.45 91.35
AT3G29320.1 Thale cress plastid 89.36 89.09
CDY44394 Canola plastid 84.15 86.5
CDY04076 Canola plastid 83.52 86.31
PGSC0003DMT400008970 Potato extracellular, plastid 16.89 79.8
KRH18405 Soybean endoplasmic reticulum, plastid 75.91 74.44
KRG93626 Soybean plastid 76.02 74.31
PGSC0003DMT400006337 Potato cytosol 14.81 73.2
VIT_14s0108g01560.t01 Wine grape plastid 74.14 72.4
Solyc03g065340.2.1 Tomato plastid 72.58 72.05
PGSC0003DMT400020094 Potato cytosol 30.76 71.26
CDY38600 Canola extracellular 7.72 64.91
CDY38599 Canola cytosol 20.33 63.31
CDX99080 Canola cytosol 54.01 61.59
CDX86109 Canola cytosol 53.91 61.47
Protein Annotations
KEGG:00500+2.4.1.1MapMan:3.2.3.3.4Gene3D:3.40.50.2000GO:A0A078D7H2EnsemblPlants:CDX85266ProteinID:CDX85266
ProteinID:CDX85266.1GO:GO:0003674GO:GO:0003824GO:GO:0004645GO:GO:0005488GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0008184GO:GO:0016740GO:GO:0030170EnsemblPlantsGene:GSBRNA2T00142910001
InterPro:Glycg_phsphrylasInterPro:Glyco_trans_35PFAM:PF00343PIRSF:PIRSF000460ScanProsite:PS00102PANTHER:PTHR11468
PANTHER:PTHR11468:SF8MetaCyc:PWY-5941MetaCyc:PWY-6731MetaCyc:PWY-6737MetaCyc:PWY-7238InterPro:Pyridoxal_P_attach_site
SUPFAM:SSF53756TIGRFAMs:TIGR02093UniParc:UPI0004EE5824SEG:seg::
Description
BnaC07g25770D
Coordinates
chrLK031841:+:649979..654675
Molecular Weight (calculated)
108050.0 Da
IEP (calculated)
5.463
GRAVY (calculated)
-0.350
Length
959 amino acids
Sequence
(BLAST)
001: MDTMRIPGVS SGAESLIQCN ALSSLVGRRS DNGRWRTRMF PARSRTWRLS PKRRLFPSVK AVSSEPKEKV ADVVIDSEQE GFSSLSPFGP DAASVASSIK
101: YHSEFTPLFS PEKFELPKAF FATAQSVRDA LIINWNATYE YYNRVNPKQA YYLSMEFLQG RALSNAVGNL GLTGAYADAL KSLGFDLESV ATQEPDPALG
201: NGGLGRLASC FLDSMATLNY PAWGYGLRYK YGLFKQRITK DGQEEVAEDW LELSNPWEIV RNDVSYPVKF YGKVVSGSDG KKQWIGGEDI VAVAYDVPIP
301: GYKTKTTINL RLWSTKAPAA DFDLSSYNSG KHTEAAQALF NAEKICYVLY PGDESNKGKA LRLKQQYTLC SASLQDIIAR FETRSGGSIN WEEFPEKVAV
401: QMNDTHPTLC IPELMRILMD LKGLSWEDAW KITQRTVAYT NHTVLPEALE KWSLDLMGKL LPRHVEIIEM IDEELVSTIV SEYGTEDPDF LKEKLKAMRI
501: LENVELPSAF ADVIVKPKNT KDSKEAAQTV VVKKEQEEEE TAGEEVEVIP EPTVKPPKMV RMANLAVVGG HAVNGVAEIH SEIVKKDVFN EFVKLWPDKF
601: QNKTNGVTPR RWISFCNTYL SDIITSWIGT EDWVLNTEKL AELRKFADDE DLQSEWRAAK KKNKLKVVSL IKERTGYTVN PDAMFDIQIK RIHEYKRQLL
701: NILGIVYRYK KMKEMSASER EKAFVPRVCI FGGKAFATYV QAKRIVKFIT DVGSTINNDP EIGDLLKVIF VPDYNVSVSE LLIPASELSQ HISTAGMEAS
801: GTSNMKFSMN GCILIGTLDG ANVEIREEVG EENFFLFGAK ADEIVNLRKE RAEGKFVPDP IFEEVKQYVR SGVFGSNYDE LIGSLEGNEG FGRADYFLVG
901: KDFPSYVECQ EKVDEAYRDQ KRWTRMSILN TAGSFKFSSD RTIHEYAKDI WNIKQVELP
Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.