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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 6
  • mitochondrion 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra033098.1-P Field mustard plastid 99.36 99.36
CDY04076 Canola plastid 95.61 96.12
CDX86372 Canola plastid 87.03 84.58
AT3G29320.1 Thale cress plastid 86.92 84.3
CDX85266 Canola plastid 86.5 84.15
PGSC0003DMT400008970 Potato extracellular, plastid 17.15 78.82
KRH18405 Soybean endoplasmic reticulum, plastid 76.53 73.01
PGSC0003DMT400006337 Potato cytosol 15.11 72.68
KRG93626 Soybean plastid 76.1 72.38
VIT_14s0108g01560.t01 Wine grape plastid 76.1 72.3
PGSC0003DMT400020094 Potato cytosol 31.83 71.74
Solyc03g065340.2.1 Tomato plastid 73.2 70.7
CDY38600 Canola extracellular 7.82 64.04
CDY38599 Canola cytosol 21.01 63.64
CDX99080 Canola cytosol 55.63 61.71
CDX86109 Canola cytosol 55.52 61.59
Protein Annotations
KEGG:00500+2.4.1.1MapMan:3.2.3.3.4Gene3D:3.40.50.2000GO:A0A078I4C3UniProt:A0A078I4C3EnsemblPlants:CDY44394
ProteinID:CDY44394ProteinID:CDY44394.1GO:GO:0003674GO:GO:0003824GO:GO:0004645GO:GO:0005488
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0008184GO:GO:0016740GO:GO:0016757
GO:GO:0030170GO:GO:0102250GO:GO:0102499EnsemblPlantsGene:GSBRNA2T00080067001InterPro:Glycg_phsphrylasInterPro:Glyco_trans_35
PFAM:PF00343PIRSF:PIRSF000460ScanProsite:PS00102PANTHER:PTHR11468PANTHER:PTHR11468:SF8MetaCyc:PWY-5941
MetaCyc:PWY-6731MetaCyc:PWY-6737MetaCyc:PWY-7238InterPro:Pyridoxal_P_attach_siteSUPFAM:SSF53756TIGRFAMs:TIGR02093
UniParc:UPI0004EE6D22SEG:seg::::
Description
BnaA02g29830DAlpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:A0A078I4C3]
Coordinates
chrLK032588:-:83572..88535
Molecular Weight (calculated)
105282.0 Da
IEP (calculated)
5.825
GRAVY (calculated)
-0.348
Length
933 amino acids
Sequence
(BLAST)
001: MDTMRISAGA EKIPVKCNSL SSLVTRRWRT KTFPARIRTW RLLSVKSIST NPKTLVTDSE QVASSIKHHS EFTPLFSPEK FELPKAFFAT AQSVRDALIV
101: NWNATYEYYN RVNPKQAYYL SMEFLQGRAL SNAVGNLGLT GAYGDALKSL GFELESVAGQ EPDPALGNGG LGRLASCFLD SLATLNYPAW GYGLRYKYGL
201: FKQIITKDGQ EEAAEDWLEL SNPWEIVRND VSYPVKFYGK VVFGSDGKKR WIGGEDVVAV AYDVPIPGYK TKTTINLRLW STKAPSGDFD LSSYNSGKHT
301: EAAEALFNAE KICYVLYPGD ESDEGKALRL KQQYTLCSAS LQDIVARFET RSGGSVNWEE FPEKVAVQMN DTHPTLCIPE LMRILMDLKG LSWEDAWRIT
401: QRTVAYTNHT VLPEALEKWS LELMEKLLPR HVEIIEKIDE ELVSTIVSEY GTENPDLLKE KLKAMRILEN VELPSAFADV IVKPESKPAI AEKTVDQTKD
501: SKEDAQTVVK KEVEEEETAG VIAEVIPEPP KMVRMANLAV VGGHAVNGVA EIHSEIVKTD VFNDFVKLWP DKFQNKTNGV TPRRWIRFCN PYLSDIITNW
601: IGTEDWVLNT EKLAELRKFA DDEDLQSEWR AAKKKNKLKV VSLIKERTGY TVNPDAMFDI QIKRIHEYKR QLLNILGIVY RYKKMKEMSA SERKKAFVPR
701: VCIFGGKAFA TYVQAKRIVK FITDVGSTIN HDPEIGDLLK VIFVPDYNVS VAELLIPASE LSQHISTAGM EASGTSNMKF SMNGCILIGT LDGANVEIRE
801: EVGEENFFLF GAKADEIVDL RKERAEGKFV PDPSFEEVKQ FVRSGVFGSN KYDELIGSLE GNEGFGRADY FLVGKDFPSY VECQEKVDKA YRDQKRWTRM
901: SILNTAGSSK FSSDRTIHEY AKDIWNIKQV ELP
Best Arabidopsis Sequence Match ( AT3G29320.1 )
(BLAST)
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.