Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g065340.2.1 | Tomato | plastid | 89.37 | 38.3 |
| CDY04076 | Canola | plastid | 71.74 | 32.0 |
| Bra033098.1-P | Field mustard | plastid | 71.74 | 31.83 |
| CDY44394 | Canola | plastid | 71.74 | 31.83 |
| VIT_14s0108g01560.t01 | Wine grape | plastid | 73.67 | 31.06 |
| KRG93626 | Soybean | plastid | 73.43 | 30.99 |
| KRH18405 | Soybean | endoplasmic reticulum, plastid | 73.19 | 30.98 |
| AT3G29320.1 | Thale cress | plastid | 71.74 | 30.87 |
| CDX85266 | Canola | plastid | 71.26 | 30.76 |
| CDX86372 | Canola | plastid | 70.53 | 30.42 |
| Bra025392.1-P | Field mustard | plastid | 70.53 | 30.42 |
| PGSC0003DMT400072963 | Potato | cytosol, extracellular, plastid | 68.84 | 29.23 |
| CDY38599 | Canola | cytosol | 18.36 | 24.68 |
| PGSC0003DMT400081273 | Potato | cytosol, plastid | 40.34 | 16.62 |
| CDY38600 | Canola | extracellular | 0.0 | 0.0 |
| PGSC0003DMT400006337 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400008970 | Potato | extracellular, plastid | 0.0 | 0.0 |
Protein Annotations
| KEGG:00500+2.4.1.1 | Gene3D:3.40.50.2000 | MapMan:35.1 | ProteinID:BAA00407 | ProteinID:BAA00407.1 | ProteinID:CAA36612 |
| ProteinID:CAA36612.1 | EMBL:D00520 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004645 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008184 | GO:GO:0009501 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0016740 | GO:GO:0016757 | GO:GO:0030170 | GO:GO:0042802 | GO:GO:0102250 | GO:GO:0102499 |
| InterPro:Glyco_trans_35 | UniProt:M1ACZ6 | PFAM:PF00343 | EnsemblPlantsGene:PGSC0003DMG400007782 | PGSC:PGSC0003DMG400007782 | EnsemblPlants:PGSC0003DMT400020094 |
| PANTHER:PTHR11468 | PANTHER:PTHR11468:SF8 | SUPFAM:SSF53756 | UniParc:UPI0002952C3F | EMBL:X52385 | SEG:seg |
Description
Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic [Source:PGSC_GENE;Acc:PGSC0003DMG400007782]
Coordinates
chr00:+:38868496..38871503
Molecular Weight (calculated)
47494.2 Da
IEP (calculated)
5.546
GRAVY (calculated)
-0.330
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDTHPTLCI PELMRILIDL KGLNWNEAWN ITQRTVAYTN HTVLPEALEK WSYELMQKLL PRHVEIIEAI DEELVHEIVL KYGSMDLNKL EEKLTTMRIL
101: ENFDLPSSVA ELFIKPEISV DDDTETVEVH DKVEASDKVV TNDEDDTGKK TSVKIEAAAE KDIDKKTPVS PEPAVIPPKK VRMANLCVVG GHAVNGVAEI
201: HSEIVKEEVF NDFYELWPEK FQNKTNGVTP RRWIRFCNPP LSAIITKWTG TEDWVLKTEK LAELQKFADN EDLQNEWREA KRSNKIKVVS FLKEKTGYSV
301: VPDAMFDIQV KRIHEYKRQL LNIFGIVYRY KKMKEMTAAE RKTNFVPRVC IFGGKAFATY VQAKRIVKFI TDVGATINHD PEIGDLLKVV FVPDYNVSVA
401: ELLIPASDLS EHIR
101: ENFDLPSSVA ELFIKPEISV DDDTETVEVH DKVEASDKVV TNDEDDTGKK TSVKIEAAAE KDIDKKTPVS PEPAVIPPKK VRMANLCVVG GHAVNGVAEI
201: HSEIVKEEVF NDFYELWPEK FQNKTNGVTP RRWIRFCNPP LSAIITKWTG TEDWVLKTEK LAELQKFADN EDLQNEWREA KRSNKIKVVS FLKEKTGYSV
301: VPDAMFDIQV KRIHEYKRQL LNIFGIVYRY KKMKEMTAAE RKTNFVPRVC IFGGKAFATY VQAKRIVKFI TDVGATINHD PEIGDLLKVV FVPDYNVSVA
401: ELLIPASDLS EHIR
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.