Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04076 | Canola | plastid | 63.96 | 21.23 |
| CDY44394 | Canola | plastid | 63.64 | 21.01 |
| CDX86372 | Canola | plastid | 63.96 | 20.52 |
| AT3G29320.1 | Thale cress | plastid | 63.96 | 20.48 |
| CDX85266 | Canola | plastid | 63.31 | 20.33 |
| VIT_14s0108g01560.t01 | Wine grape | plastid | 60.06 | 18.84 |
| PGSC0003DMT400020094 | Potato | cytosol | 24.68 | 18.36 |
| KRH18405 | Soybean | endoplasmic reticulum, plastid | 57.14 | 18.0 |
| KRG93626 | Soybean | plastid | 57.14 | 17.94 |
| Solyc03g065340.2.1 | Tomato | plastid | 55.84 | 17.81 |
| PGSC0003DMT400006337 | Potato | cytosol | 11.04 | 17.53 |
| CDX86109 | Canola | cytosol | 46.75 | 17.12 |
| CDX99080 | Canola | cytosol | 46.75 | 17.12 |
| PGSC0003DMT400008970 | Potato | extracellular, plastid | 7.47 | 11.33 |
| CDY38600 | Canola | extracellular | 0.97 | 2.63 |
Protein Annotations
| KEGG:00500+2.4.1.1 | Gene3D:3.40.50.2000 | MapMan:35.1 | GO:A0A078HML9 | UniProt:A0A078HML9 | EnsemblPlants:CDY38599 |
| ProteinID:CDY38599 | ProteinID:CDY38599.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004645 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008184 | GO:GO:0016740 | GO:GO:0016757 |
| GO:GO:0102250 | GO:GO:0102499 | EnsemblPlantsGene:GSBRNA2T00066285001 | InterPro:Glyco_trans_35 | PFAM:PF00343 | PANTHER:PTHR11468 |
| PANTHER:PTHR11468:SF8 | MetaCyc:PWY-5941 | MetaCyc:PWY-6731 | MetaCyc:PWY-6737 | MetaCyc:PWY-7238 | SUPFAM:SSF53756 |
| UniParc:UPI0004EF36EE | : | : | : | : | : |
Description
BnaC06g30220DAlpha-1,4 glucan phosphorylase [Source:UniProtKB/TrEMBL;Acc:A0A078HML9]
Coordinates
chrLK032427:-:213588..214912
Molecular Weight (calculated)
35081.3 Da
IEP (calculated)
4.748
GRAVY (calculated)
-0.225
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKWFLDQMV RNVGLVEKTF WPFAYDVPIP GYKTKTTGQQ KPLQQILICL HITLASIPRQ QKLYLTLSFP NESNEGKALR LKQQYTLCSA SLQDIIARFE
101: TRSGGSVSWE EFPEKVAVQM NDTHPTLCTP ELMSILIDLK GLSWEDAWKI TQRVLPEALE KWSLELMEKF LPCHIDEELV GTIVSEYGTA DPDLLQEKLI
201: KAMMILENFE LPSAFADVIV KPQNKPVIAE NTVDQSQDSK EDAQTARAKA EEVISEPARW TRMSIILNTA GSSKFSSDRT IHEYAKDIWN IKQVELPCVL
301: TSLLSELF
101: TRSGGSVSWE EFPEKVAVQM NDTHPTLCTP ELMSILIDLK GLSWEDAWKI TQRVLPEALE KWSLELMEKF LPCHIDEELV GTIVSEYGTA DPDLLQEKLI
201: KAMMILENFE LPSAFADVIV KPQNKPVIAE NTVDQSQDSK EDAQTARAKA EEVISEPARW TRMSIILNTA GSSKFSSDRT IHEYAKDIWN IKQVELPCVL
301: TSLLSELF
001: MDTMRISGVS TGAEVLIQCN SLSSLVSRRC DDGKWRTRMF PARNRDLRPS PTRRSFLSVK SISSEPKAKV TDAVLDSEQE VFISSMNPFA PDAASVASSI
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
101: KYHAEFTPLF SPEKFELPKA FFATAQSVRD ALIMNWNATY EYYNRVNVKQ AYYLSMEFLQ GRALSNAVGN LGLNSAYGDA LKRLGFDLES VASQEPDPAL
201: GNGGLGRLAS CFLDSMATLN YPAWGYGLRY KYGLFKQRIT KDGQEEAAED WLELSNPWEI VRNDVSYPIK FYGKVVFGSD GKKRWIGGED IVAVAYDVPI
301: PGYKTKTTIN LRLWSTKAPS EDFDLSSYNS GKHTEAAEAL FNAEKICFVL YPGDESTEGK ALRLKQQYTL CSASLQDIVA RFETRSGGNV NWEEFPEKVA
401: VQMNDTHPTL CIPELMRILM DLKGLSWEDA WKITQRTVAY TNHTVLPEAL EKWSLELMEK LLPRHVEIIE KIDEELVRTI VSEYGTADPD LLEEKLKAMR
501: ILENVELPSA FADVIVKPVN KPVTAKDAQN GVKTEQEEEK TAGEEEEDEV IPEPTVEPPK MVRMANLAVV GGHAVNGVAE IHSEIVKQDV FNDFVQLWPE
601: KFQNKTNGVT PRRWIRFCNP YLSDIITNWI GTEDWVLNTE KVAELRKFAD NEDLQSEWRA AKKKNKLKVV SLIKERTGYT VSPDAMFDIQ IKRIHEYKRQ
701: LLNILGIVYR YKKMKEMSAS EREKAFVPRV CIFGGKAFAT YVQAKRIVKF ITDVASTINH DPEIGDLLKV IFVPDYNVSV AELLIPASEL SQHISTAGME
801: ASGTSNMKFS MNGCVLIGTL DGANVEIREE VGEENFFLFG AKADQIVNLR KERAEGKFVP DPTFEEVKKF VGSGVFGSNS YDELIGSLEG NEGFGRADYF
901: LVGKDFPSYI ECQEKVDEAY RDQKRWTRMS IMNTAGSFKF SSDRTIHEYA KDIWNIKQVE LP
Arabidopsis Description
PHS1Alpha-glucan phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIB2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.