Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0185g00030.t01 | Wine grape | cytosol | 54.95 | 16.29 |
| CDX86603 | Canola | nucleus | 68.13 | 15.2 |
| CDY15524 | Canola | nucleus | 69.23 | 15.18 |
| CDY18265 | Canola | nucleus | 69.23 | 15.18 |
| PGSC0003DMT400069104 | Potato | nucleus | 46.15 | 13.82 |
| Solyc09g059630.1.1 | Tomato | endoplasmic reticulum, extracellular | 47.25 | 12.68 |
| CDX86285 | Canola | nucleus | 43.96 | 9.71 |
| CDX85358 | Canola | cytosol | 42.86 | 9.18 |
Protein Annotations
| EnsemblPlants:CDX89783 | EnsemblPlantsGene:GSBRNA2T00150225001 | Gene3D:1.20.58.2190 | InterPro:PUB-like_dom_sf | InterPro:PUB_domain | PANTHER:PTHR13020 |
| PANTHER:PTHR13020:SF33 | PFAM:PF09409 | ProteinID:CDX89783 | ProteinID:CDX89783.1 | SMART:SM00580 | SUPFAM:SSF143503 |
| UniParc:UPI0004EE96CD | MapMan:35.2 | : | : | : | : |
Description
BnaA10g02990D
Coordinates
chrLK031861:+:47349..48579
Molecular Weight (calculated)
10439.7 Da
IEP (calculated)
8.716
GRAVY (calculated)
-0.421
Length
91 amino acids
Sequence
(BLAST)
(BLAST)
1: MKVLVIHNAL YYKSCPALED DAKVKRAFQT LRTYMGNVSK NPDEEKFRKI RLTNQTFQDR AGSLKGGIEF VELCGFEKME GEDVLVLTKV H
001: MEIDDNASGS GEAAEEMVVP DVDNNILEEL EAMGFPKARA TRALHYSGNA SLEAAVNWVV EHENDPDVDE MPKVPSNSNV GPAKPALTPE EVKLKAQELR
101: ERARKKKEEE EKRMEREREK ERIRIGKELL EAKRMEEVNE RKRLMFLRKA EKEEEKRARE KIRQKLEEDK AERRRKLGLP PEDPATAAAK PSVPVVEEKK
201: VTLPIRPATK TEQMRECLRS LKQAHKEDDA KVKRAFQTLL TYMGNVAKNP DEEKFRKIRL TNQTFQERVG SLRGGIEFME LCGFEKIEGG EFLFLPRDKI
301: DSAIINSAGT ELNSAINNPF FGVL
101: ERARKKKEEE EKRMEREREK ERIRIGKELL EAKRMEEVNE RKRLMFLRKA EKEEEKRARE KIRQKLEEDK AERRRKLGLP PEDPATAAAK PSVPVVEEKK
201: VTLPIRPATK TEQMRECLRS LKQAHKEDDA KVKRAFQTLL TYMGNVAKNP DEEKFRKIRL TNQTFQERVG SLRGGIEFME LCGFEKIEGG EFLFLPRDKI
301: DSAIINSAGT ELNSAINNPF FGVL
Arabidopsis Description
F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.