Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- extracellular 4
- nucleus 1
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400069104 | Potato | nucleus | 78.47 | 87.5 |
| VIT_07s0185g00030.t01 | Wine grape | cytosol | 48.97 | 54.07 |
| KRH07644 | Soybean | cytosol | 47.79 | 52.26 |
| AT5G48690.1 | Thale cress | nucleus | 46.31 | 48.61 |
| CDX89783 | Canola | cytosol | 12.68 | 47.25 |
| CDX86285 | Canola | nucleus | 48.67 | 40.05 |
| Bra037466.1-P | Field mustard | nucleus | 48.67 | 39.95 |
| CDX85358 | Canola | cytosol | 49.26 | 39.29 |
| Solyc12g098420.1.1 | Tomato | cytosol | 48.08 | 39.09 |
| Solyc09g092040.2.1 | Tomato | cytosol | 21.24 | 29.03 |
Protein Annotations
| Gene3D:1.10.8.10 | Gene3D:1.20.58.2190 | MapMan:35.2 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR015940 | UniProt:K4CTP7 | PFAM:PF00627 | PFAM:PF09409 | PFscan:PS50030 |
| PANTHER:PTHR13020 | PANTHER:PTHR13020:SF34 | InterPro:PUB-like_dom_sf | InterPro:PUB_domain | SMART:SM00580 | SUPFAM:SSF143503 |
| SUPFAM:SSF46934 | SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc09g059630.1 | EnsemblPlants:Solyc09g059630.1.1 | InterPro:UBA | InterPro:UBA-like_sf |
| UniParc:UPI000276B75B | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr9:-:54942304..54949719
Molecular Weight (calculated)
38938.5 Da
IEP (calculated)
9.789
GRAVY (calculated)
-0.699
Length
339 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFFLLSLFS IKSTLTPTFF YPTNTMDASE INRSLVSELE AMGFSEAQAT KALCSSGNSS LEAAVNWIVD HEDEANNDEM PMVSVDIIET PTPTFDSEQA
101: KLKAQELRER ARKRREEEEK KLDKEREKER IRAGKERLAT KRMAEENERK RFEAQRKTEK EEERRARERI RQKLQQDMAD RRARLGSSFN SGTSSKFIKT
201: SEPETKNPLK VDSAALSGNL ITNKEVFMEC LRSLRRQHKE EDVKVQRAFK TLLVYVRNIV SNPDEGKFRK IRLSNPAFQA RVGIFKEGVQ FLQLCGFERA
301: EEGDLLVLRS NKVNMELLRS AGMVLHSAIT NPFFGLLSK
101: KLKAQELRER ARKRREEEEK KLDKEREKER IRAGKERLAT KRMAEENERK RFEAQRKTEK EEERRARERI RQKLQQDMAD RRARLGSSFN SGTSSKFIKT
201: SEPETKNPLK VDSAALSGNL ITNKEVFMEC LRSLRRQHKE EDVKVQRAFK TLLVYVRNIV SNPDEGKFRK IRLSNPAFQA RVGIFKEGVQ FLQLCGFERA
301: EEGDLLVLRS NKVNMELLRS AGMVLHSAIT NPFFGLLSK
001: MSDGTENAAI EVNHGLLKEL EDMGFSMARA AWALHHSGNS SLEAAVNWII DHENESQFEN MPLVEFNIEI ESPNPSDDTA ETSHARAKEL SEQARKLREE
101: QETKRERERE KERIRAGKEL METKRIAEEN ERKRNIALRK AEKDEEKKAR EKIMLKVNAD KLERKRRLGL PTETESASTS NPVSPLDPKR IVMSSPSVVS
201: KAEEMRECLR SLRRNHKDED PRITRRVFET LLTIVRNVAK KPDEERYRRI RLKNRLFHER VGRYKEGIEF MELCGFKRVE GSEFLSLSKR DSDINRLRDA
301: AFLLNSASAN PFFGLLSTEA ERP
101: QETKRERERE KERIRAGKEL METKRIAEEN ERKRNIALRK AEKDEEKKAR EKIMLKVNAD KLERKRRLGL PTETESASTS NPVSPLDPKR IVMSSPSVVS
201: KAEEMRECLR SLRRNHKDED PRITRRVFET LLTIVRNVAK KPDEERYRRI RLKNRLFHER VGRYKEGIEF MELCGFKRVE GSEFLSLSKR DSDINRLRDA
301: AFLLNSASAN PFFGLLSTEA ERP
Arabidopsis Description
Ubiquitin-associated (UBA)/TS-N domain protein [Source:UniProtKB/TrEMBL;Acc:Q5XV09]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.