Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0185g00030.t01 | Wine grape | cytosol | 64.52 | 65.15 |
| AT5G48690.1 | Thale cress | nucleus | 53.23 | 51.08 |
| PGSC0003DMT400069104 | Potato | nucleus | 49.68 | 50.66 |
| Solyc09g059630.1.1 | Tomato | endoplasmic reticulum, extracellular | 52.26 | 47.79 |
| KRH58887 | Soybean | endoplasmic reticulum | 63.87 | 47.71 |
| KRH42800 | Soybean | endoplasmic reticulum | 61.94 | 46.27 |
| CDX86285 | Canola | nucleus | 52.26 | 39.32 |
| Bra037466.1-P | Field mustard | nucleus | 51.94 | 38.98 |
| CDX85358 | Canola | cytosol | 51.61 | 37.65 |
Protein Annotations
| Gene3D:1.10.8.10 | Gene3D:1.20.58.2190 | EntrezGene:100781260 | MapMan:35.2 | EMBL:ACUP02010070 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_16G100800 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR015940 | UniProt:K7MGG0 |
| ProteinID:KRH07643.1 | EnsemblPlants:KRH07644 | ProteinID:KRH07644 | ProteinID:KRH07644.1 | PFAM:PF00627 | PFAM:PF09409 |
| PFscan:PS50030 | PANTHER:PTHR13020 | PANTHER:PTHR13020:SF33 | InterPro:PUB-like_dom_sf | InterPro:PUB_domain | SMART:SM00580 |
| SUPFAM:SSF143503 | SUPFAM:SSF46934 | InterPro:UBA | InterPro:UBA-like_sf | UniParc:UPI000233EA74 | SEG:seg |
Description
hypothetical protein
Coordinates
chr16:-:20087052..20096054
Molecular Weight (calculated)
35882.9 Da
IEP (calculated)
8.616
GRAVY (calculated)
-0.855
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPKVNEKL LEDLEVMGFP KARATRALHY SGNTSLEDAI NWIIDHENDI DIDEMPLVDV DIDIESTESF PITEEMRMKA QSLRVQERKR KEEEEKRLER
101: EREKERIQAG KRLLEAKRIA EENERKRNLA LKKAEKEEEK RAREKVLKKL EQDKLNRRYK QGLPLEGQAA VRSSAIEIEQ EKKSKSVYNT TAKAEQLREC
201: LRNLKRNHQG EDARVRRAFQ TILVYVGNVA KNPKEDKYRK IRLNNPLFQD RVGSLNGGVE FLELCGFERT GDFLYLPDEK VDMALLNSAG LVLNSAMTNP
301: FFGVLSSTHN
101: EREKERIQAG KRLLEAKRIA EENERKRNLA LKKAEKEEEK RAREKVLKKL EQDKLNRRYK QGLPLEGQAA VRSSAIEIEQ EKKSKSVYNT TAKAEQLREC
201: LRNLKRNHQG EDARVRRAFQ TILVYVGNVA KNPKEDKYRK IRLNNPLFQD RVGSLNGGVE FLELCGFERT GDFLYLPDEK VDMALLNSAG LVLNSAMTNP
301: FFGVLSSTHN
001: MAGVSLKCGD CGTLLKSVEE AQEHAELTSH SNFAESTEAV LNLVCTTCTK PCRSKIESDL HTKRTGHTEF VDKTLETIKP ISLEAPKVAM EIDDNASGSG
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
101: EAAEEMVVPD VDNNILEELE AMGFPKARAT RALHYSGNAS LEAAVNWVVE HENDPDVDEM PKVPSNSNVG PAKPALTPEE VKLKAQELRE RARKKKEEEE
201: KRMEREREKE RIRIGKELLE AKRMEEVNER KRLMFLRKAE KEEEKRAREK IRQKLEEDKA ERRRKLGLPP EDPATAAAKP SVPVVEEKKV TLPIRPATKT
301: EQMRECLRSL KQAHKEDDAK VKRAFQTLLT YMGNVAKNPD EEKFRKIRLT NQTFQERVGS LRGGIEFMEL CGFEKIEGGE FLFLPRDKID SAIINSAGTE
401: LNSAINNPFF GVL
Arabidopsis Description
F13M7.16 protein [Source:UniProtKB/TrEMBL;Acc:Q9MAT3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.